Gene Nmar_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0238 
Symbol 
ID5773348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp209508 
End bp209999 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content39% 
IMG OID641315859 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001581572 
Protein GI161527746 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAG CAGAAAATTT CCCTGAAGGA CTAAAACCAT TAGGAAAAAT TTCAGATGGA 
GAAGGACACT TTCACATTAT GTGGGGTCCT GGAAGATCAG ATGCTGAAGC ATTTTCAGAT
GCTGATGTAA AAGCAGCATA TGAAGCAAGA GGAGAAGAAC AAGTTCCTCT TGGCGTAAGC
GGAACAATGG TTGCAGTTGA TTGGGATTCT TGTGTTGCAG ATGGTGCATG TATTGAAGCA
TGTCCTGTTC AAGTTTTTCA GTGGTATAGA ACTGAAAAAG ATATTCCTGC AAAAGATGTA
GTTGGTCAAA CTTTTGAGGG AACTGGAAGT TCTGTCAAAG ATGAAAGAAA AGACATGACT
GACAAGGCAG ATCCAATTAG AGAACATGAT TGTATATGGT GTATGGCATG TGTTTCTGTT
TGTCCTCCAC AAGCAATCAA AGTAGATCAA TCAAATGTTG AAAAACATGA AAGTGCTGCA
AAAACCCTGT AG
 
Protein sequence
MPIAENFPEG LKPLGKISDG EGHFHIMWGP GRSDAEAFSD ADVKAAYEAR GEEQVPLGVS 
GTMVAVDWDS CVADGACIEA CPVQVFQWYR TEKDIPAKDV VGQTFEGTGS SVKDERKDMT
DKADPIREHD CIWCMACVSV CPPQAIKVDQ SNVEKHESAA KTL