| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0229 |
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| Symbol | |
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| ID | 5774655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 201415 |
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| End bp | 203196 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641315850 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001581563 |
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| Protein GI | 161527737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAATTC GTCAGCCCAT AGTGGCAGTT CTTGGTCACG TAGACTCTGG CAAAACATCA
CTTTTAGATA GAATTCGTGG AACAGGTGTT CAAGGTAGAG AAGCTGGAGG AATCACACAA
CATATCGGTG CTAGCTTTCT ACCTACTGAA ACAATCAAAG AAACCTGTGG TCCTTTATAC
AAGAAACTAG AACAATCAGA AAACAAAGTT CCCGGAATTT TAGTTATTGA CACACCAGGA
CACGAAGTCT TTACAAATCT TCGTTCTCGT GGAGGTTCTG CTGCTGATAT TGCAGTTTTA
GTAGTTGATG TTAATCGTGG ATTTCAACCA CAAACAAACG AAAGTTTGAA AATTTTACAA
AGTAGAAAAG TTCCTTTTGT TGTAGCTTTG AACAAATGTG ACCAAATTTC TGGATGGAGA
AAATCTGAAA CATCCTTTAT TTCACAAGCA ATCAAAGAAC AAGATGCATC TATTCAAGCT
GATCTTGATC AAAAAATCTA TGATGTAGTT GGCACACTTT CTGTATTAGG ATACCAATCT
GAAGCATTTT ATCGTGTAAA GGACTTTAAA TCTGAAATTG CAATCGTTCC AATCTCTGCA
CGTTCTGGTG TTGGAATTCC AGAATTACTT AGCGTTTTAG TGGGGTTAAC TCAACAATAT
CTCCAAAAAA GACTAAGTCA AGAAGAAAAA GATCCCCGTG GAATTGTTTT AGAAGTAAAA
GATGAAGTTG GATTAGGTCA AACTGCAAAT ATTATACTAA TTGATGGTTC AATCAAAAAA
GAAGACAGTA TAGTTGTTGC AAAACGTGAT GGTGTAATTG TCACAAAACC AAAAGCATTG
TTGTTGCCAA AAGCTCTTGA TGAAATGCGT GATCCTCGTG ATAAATTCAA ACCAACCCCT
CAGGTAGATG CCGCAGCCGG ATTAAAGATT GCATCCCCTG AACTAGAAGG AGTTCTTCCG
GGAAGTACTC TCTATGTTGC AAGAAATGAT GATGAGGTTA CAAAATACAC CAATCTCATA
GAATCTGAGA TGAAATCCAT GTTTGTAGAT ACTGAAACTA ATGGAATTAT TCTAAAATGT
GATACCATTG GTTCACTTGA AGCTATTGTT GAGATGCTAC GACGATCACA AGTACCAGTA
GCTAAAGCCG ATATTGGTCC TGTAAATAGA CGTGATGTAA TTGAAGCTAA AGCAATAAAA
GAAAAGGACA GACATTTGGG AATTGTTTTA GCATTTAATG TCAAGGTTTT ACCTGATGCA
AAAGAAGAAT CAGAAATTAG TCACATCAAA ATCTTTGAAG ACAAAGTAAT CTATAGTTTA
ATTGATAACT ATAATGCTTG GGTTGAAGAA GATACCGCAC ATCAAGAGGA TGCAATATTT
TCTGAATTAA CACCTGTTTC CAAGTTTACT TTTCTTAAAG GAATGGTGTT TAGAAATAAC
AATCCTGCAG TTTTTGGAAT TAGAATAGAT GTTGGAACAC TAAAACACAA AATTCCATTT
ATGAATTCTG ATGGACGAAG AATTGGAAAC ATCCACCAAC TTCAACATGA TAAAAAAACA
GTAACTTCAG CTAAAACAGG TGATGAAGTT GCATGTTCAG TTCAAGATGT AACCATTGGA
AGACAAATTT TTGAAGAAGA AGTGTTTTAC ACATTTCCTC CATCTCATGA AGCAAAACAA
TTACTAAACA AATTCATGCA TAAACTAAGT ACTGAAGAAC AAGAAGTACT AAATGAAATA
GTAGAAATTC AAAGAAAGAA AGAAGCAGCT TATGCTTACT AA
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| Protein sequence | MQIRQPIVAV LGHVDSGKTS LLDRIRGTGV QGREAGGITQ HIGASFLPTE TIKETCGPLY
KKLEQSENKV PGILVIDTPG HEVFTNLRSR GGSAADIAVL VVDVNRGFQP QTNESLKILQ
SRKVPFVVAL NKCDQISGWR KSETSFISQA IKEQDASIQA DLDQKIYDVV GTLSVLGYQS
EAFYRVKDFK SEIAIVPISA RSGVGIPELL SVLVGLTQQY LQKRLSQEEK DPRGIVLEVK
DEVGLGQTAN IILIDGSIKK EDSIVVAKRD GVIVTKPKAL LLPKALDEMR DPRDKFKPTP
QVDAAAGLKI ASPELEGVLP GSTLYVARND DEVTKYTNLI ESEMKSMFVD TETNGIILKC
DTIGSLEAIV EMLRRSQVPV AKADIGPVNR RDVIEAKAIK EKDRHLGIVL AFNVKVLPDA
KEESEISHIK IFEDKVIYSL IDNYNAWVEE DTAHQEDAIF SELTPVSKFT FLKGMVFRNN
NPAVFGIRID VGTLKHKIPF MNSDGRRIGN IHQLQHDKKT VTSAKTGDEV ACSVQDVTIG
RQIFEEEVFY TFPPSHEAKQ LLNKFMHKLS TEEQEVLNEI VEIQRKKEAA YAY
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