| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0228 |
|---|
| Symbol | |
|---|
| ID | 5774638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 201007 |
|---|
| End bp | 201408 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641315849 |
|---|
| Product | nucleoside-diphosphate kinase |
|---|
| Protein accession | YP_001581562 |
|---|
| Protein GI | 161527736 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGAAA AATCATTATT CATTGTAAAG CCAGATGCAG TAGCTAGAAA TCTAGTTGGC
GAAGTTATCT CTAGATTTGA AAGAAAGGGA TTCAAAATTT TGAAATTAAA GATGTTTACA
TTTACACAAG AACAAGCAGA AAACTTCTAT GGTGTTCATA AAGACAAACC ATTTTTTGGT
GAACTGACAT CATTTATCAC ATCAGGACCT GTAGTTGCAG CAATTATTGA AGGCAATAAT
GCAATTGCAA CTACTAGAAT AATGATTGGA GCAACAAAAT CCTTTGAAGC AGCACCTGGT
TCTATTAGAG GTGACTTTGG ATTAGGATTT AGTGAAAATA TTATTCACGC ATCAGATTCA
CAAGAAAGTT TTGATCACGA ATCGAGGGTA GCATTTGAGT GA
|
|---|
| Protein sequence | MTEKSLFIVK PDAVARNLVG EVISRFERKG FKILKLKMFT FTQEQAENFY GVHKDKPFFG
ELTSFITSGP VVAAIIEGNN AIATTRIMIG ATKSFEAAPG SIRGDFGLGF SENIIHASDS
QESFDHESRV AFE
|
|---|
| |