Gene Nmar_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0192 
Symbol 
ID5773735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp173772 
End bp174686 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content36% 
IMG OID641315810 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001581526 
Protein GI161527700 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.749275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG TTGGAAAAAT CTGGATGAAT GGAAAATTAG TACCATTCAA GGATGCCAAA 
GTTCATGTTC TAACTCATGC ATTACATTAT TCTACATCAA TCTTTGAAGG AATCAGATGT 
TATAATACGC CAAATGGTTC TGCCATTTTC AGACTACCAG AACACGTAGA TAGATTCTTC 
AAATCAGCAA AATTGTATTC CATGAAAATG CAGTTTTCAA AAAAAGAAAT TTCTGATGGA 
ATCATCAAAA CAGTAAAGGC AAGTGGACTC AAAGAGTGTT ACATTAGACC ACTAGCATAC 
TATGGATATG GAACAATGGG TTTAACTCCA ACACAAAACA AAGTAGATGC TTCTATTTCA 
TGTTGGGAGT GGAAGATGGG TGAATCAAAA GCAGGGAAAT TCTCAGGAGC AAAATGTAAA 
GTATCAAGTT GGATAAAGAT TGATTCCAGA TCTCAACCAA CACAAGCAAA AGCAGCATCA 
AACTATGCAA ATGCAGCATT AGCTAGAATG GAAGCATTAG AGAACGGATA TGATGAAGCA 
ATCATGTTGA ATTGGCACGG AAAAGTTGCC GAAGGTAGTG CCGAGAACAT CTTTGTTGTA 
AAAGATGACA TTATTCAAAC ACCTCCATTG TCTGCAGGAG GATTAGAAGG AATAACAAGA 
GATAGTGTCA TACAAATCAT TGAAGAAAAT GGTGGATTTG TTATTGAACG AGATTTGGAA 
AGAGATGATC TGTATGCTGC AGATGAAATA TTCATGACAG GTACTGCTGC TGAAGTAAAA 
TCCGTAACAC AGATTGACAA AGTAAAAATC GGTAATGGAA AGATGGGCCA TATTACAAAA 
GCACTACAGA AGTCATTTAC GGATGTAGTT ATGGGCAAAG ATGAAAGATT CTTGCCTTGG 
TTGACATACA TCTAA
 
Protein sequence
MKEVGKIWMN GKLVPFKDAK VHVLTHALHY STSIFEGIRC YNTPNGSAIF RLPEHVDRFF 
KSAKLYSMKM QFSKKEISDG IIKTVKASGL KECYIRPLAY YGYGTMGLTP TQNKVDASIS 
CWEWKMGESK AGKFSGAKCK VSSWIKIDSR SQPTQAKAAS NYANAALARM EALENGYDEA 
IMLNWHGKVA EGSAENIFVV KDDIIQTPPL SAGGLEGITR DSVIQIIEEN GGFVIERDLE 
RDDLYAADEI FMTGTAAEVK SVTQIDKVKI GNGKMGHITK ALQKSFTDVV MGKDERFLPW 
LTYI