Gene Nmar_0188 details

Gene Information

• Locus tag: Nmar_0188
• ID: 5774154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 170346
• End bp: 170942
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641315805
• Product: hypothetical protein
• Protein accession: YP_001581522
• Protein GI: 161527696

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.478226
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGACCCTCG TAACAAAATC AATCGATATT AAGACACCTG TTGAGAATGT CTTTACCTAC 
TTTGCAAGAC CAGAACATGT TTCTGATCAA ATCAAAACTG ATGCAGTAGG TATGACAGTA 
GTTCCTATGG ATATTAAGGA AGGAATGGGT GTAGGTACAA CCTTTAGAAT TATCGGTGAC 
TTTAGCGGTA AACGTTTAGA GTGGGATTGT GAGACAACCG AATTTGTTAG AAATGAGAAA 
ATTACTGCAA AACAAATTGA AGGTCCATTC AAGAAATGGC AAATCACTAA TGAGTTCAAA 
TCATTAGGAA ATAACCTCAC AAGAGTTACA ATGTCAGTAG ATTATGAAAT GCCATTTGGT 
CCACTAGGAG CAATTATGGA TAAAGCAAAG TTTGCAAAAT CTGCTGAGAG AGGAATGGAA 
ACTGCCCTTT ACAACGTTAG AGGTTTGTTA GAAGGAAATG GTTCAATTCC AGTATACATC 
ACACTCGAAG CATACCAAAA ACTTCTTGCC GAAAAGAAAA AGATGAATGA TGTTCCAGTT 
TCAACTGCAC TAACTGCAAT CATTGAAAAA TACAATGAAA TTGAAGCTAA AGCATAA 

 

Protein sequence

MTLVTKSIDI KTPVENVFTY FARPEHVSDQ IKTDAVGMTV VPMDIKEGMG VGTTFRIIGD 
FSGKRLEWDC ETTEFVRNEK ITAKQIEGPF KKWQITNEFK SLGNNLTRVT MSVDYEMPFG 
PLGAIMDKAK FAKSAERGME TALYNVRGLL EGNGSIPVYI TLEAYQKLLA EKKKMNDVPV 
STALTAIIEK YNEIEAKA