Gene Nmar_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0186 
Symbol 
ID5773968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp169322 
End bp169735 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content36% 
IMG OID641315803 
Producthypothetical protein 
Protein accessionYP_001581520 
Protein GI161527694 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.480963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAT TGTATTCACT TATGTTCTTA GGTGGATATA TTTCAGCAGC TGGATTGGGA 
CTAACTTGTC CTGAATGGCC ATTATGTCCA AATGGTGTAA TGCCATCTGA AGAATATCTT
ATTGAATGGA TTCATAGATT GGCAGCTGCT ACTACAGGTG TTTTGGTTAT TGCAACTATG
GTTGCAAGCT TTCTCAACAA AAGAGCTGAT ACAAAAATTA AAGTTACAAG TACACTTGCA
ACAGTATTTG TTATTACCCA AATTACACTT GGTGCACTAG TAATTGACAC AAAACTTCAT
GCGGTTCTAG TTGCAATTCA CTTGGGAATT GGAATATTGT TATTCTCAAT GGTATTGTTA
ACTGCCTTGT TTGCCTTTAG AATTTCACGA GAATCCCAAG AGATCAAAGT CTAG
 
Protein sequence
MIVLYSLMFL GGYISAAGLG LTCPEWPLCP NGVMPSEEYL IEWIHRLAAA TTGVLVIATM 
VASFLNKRAD TKIKVTSTLA TVFVITQITL GALVIDTKLH AVLVAIHLGI GILLFSMVLL
TALFAFRISR ESQEIKV