| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0161 |
|---|
| Symbol | |
|---|
| ID | 5774431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 149412 |
|---|
| End bp | 150347 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641315777 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001581495 |
|---|
| Protein GI | 161527669 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000741959 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGACCA TTAAACAGCC TCCAAAAATC ATTTTTGGTA AAAATTGTGT ATCTGAGTTT
ATTTTTCCGA CAAAGTGTTT AGTTGTAACA TCTAAAGGAG CAAAATCTAG AGGATGGCTT
GATTATTGTG GGTTAAATGA TCAAATGATT TTTAATAATG TTGAACCAAA CCCTTCAATC
GAAACAACAG AAAAAATTAT TTCAGAATTC CAAAATTCTG ATTTTACACA TATTGTTGGT
ATTGGAGGGG GCAGCTCAAT GGATGTTGCC AAATATTGTG GTTTTAAAAT GAATAAACAA
AAACTCATGA TTCCAACTAC TTTTGGAAGC GGTAGTGAAG TAACCCGTAT TTCCGTATTG
AAGGTTAATG GAAAGAAAAA AAGTTTTCAT GATGATGGAA TCTTTTCTGA TACTGCATTA
ATTGATTCAT TTTTTCTTGA AAATTCTACA CCTAAAATTT TTAAGAATTC TGTCATAGAT
GCATGTGCAC AATGTACTGA AGCATATGAT AGTAAATCAT CAAATCCATA TACGAAGTTT
TTTTGTAATC AAGCTTTTGA ATTGTTAGAA GAAGGAATTC TTACAAATAA TAATGAAAAA
ATTGTATTGG GATCCTTATT TGATGGATTG GGATTTGGAA ATTCTTCTAC TACTTTAGGA
CATGCACTGT CCTATGTTTT TTCAAATGAG GGAATTTCTC ATGGTCATGC TTTAGCATTT
ACTACTTCTG CTGCTCACAA ATTTAACAAA TCAAAATATT TTGAACGATT TGAAAAACTA
GTTTCTTTCT TAGGTTTTGA ACCCATCACA TTAGAGCAAT CATTAGATCA TGCTACAGAA
ACAATCTTAC CTGATAAAAA ACACCTTGAT AATAACCCAA TTCCTGTATC GAAAGACGAC
ATCTATAACT TGTTAAAAAC AATTATTTCA AAATAA
|
|---|
| Protein sequence | MWTIKQPPKI IFGKNCVSEF IFPTKCLVVT SKGAKSRGWL DYCGLNDQMI FNNVEPNPSI
ETTEKIISEF QNSDFTHIVG IGGGSSMDVA KYCGFKMNKQ KLMIPTTFGS GSEVTRISVL
KVNGKKKSFH DDGIFSDTAL IDSFFLENST PKIFKNSVID ACAQCTEAYD SKSSNPYTKF
FCNQAFELLE EGILTNNNEK IVLGSLFDGL GFGNSSTTLG HALSYVFSNE GISHGHALAF
TTSAAHKFNK SKYFERFEKL VSFLGFEPIT LEQSLDHATE TILPDKKHLD NNPIPVSKDD
IYNLLKTIIS K
|
|---|
| |