Gene Nmar_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0113 
Symbol 
ID5773217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp101499 
End bp101951 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content36% 
IMG OID641315733 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001581451 
Protein GI161527625 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000348569 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGTAC TAGATGAAGA GACTCTGTTT GTTGGAACCG CTGAAGCTGA ACATGTTGAG 
ATGTATCTCA AAGCGATTTG GCTTCTTAAA GAAAGAGGAG AAGAAGTCAA AATTAGCACT
ATTGCAAAAA TGCTCAACGT TAGACAACCA AGTGTAGTTC AGATGCTAAA AAAATTAAAT
GCTAAGAATT TAGTCACTTA CAACAAAGCA GGAGTAAGAC TCACAGATGA AGGTCAAACA
ATTGGTTCTA GCATGATGAG AAACAGTAGA CTTTTGGAAG TACTAATGGA TAGTGCACTC
AAAGTAGATA TTGATGAAGA GATGGTATGT GGTATTGAAC ATCATATGAA TAAACAGTTT
ACTGATGCAC TTTGTACAAT GTTAAAACAC CCTAGAACAT CGCCACATGG TAAAGAGATT
CCAATGGGTG AATGTTGTAA ATCAGCTTCA TAG
 
Protein sequence
MDVLDEETLF VGTAEAEHVE MYLKAIWLLK ERGEEVKIST IAKMLNVRQP SVVQMLKKLN 
AKNLVTYNKA GVRLTDEGQT IGSSMMRNSR LLEVLMDSAL KVDIDEEMVC GIEHHMNKQF
TDALCTMLKH PRTSPHGKEI PMGECCKSAS