Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0113 |
Symbol | |
ID | 5773217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 101499 |
End bp | 101951 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641315733 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001581451 |
Protein GI | 161527625 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000348569 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGTAC TAGATGAAGA GACTCTGTTT GTTGGAACCG CTGAAGCTGA ACATGTTGAG ATGTATCTCA AAGCGATTTG GCTTCTTAAA GAAAGAGGAG AAGAAGTCAA AATTAGCACT ATTGCAAAAA TGCTCAACGT TAGACAACCA AGTGTAGTTC AGATGCTAAA AAAATTAAAT GCTAAGAATT TAGTCACTTA CAACAAAGCA GGAGTAAGAC TCACAGATGA AGGTCAAACA ATTGGTTCTA GCATGATGAG AAACAGTAGA CTTTTGGAAG TACTAATGGA TAGTGCACTC AAAGTAGATA TTGATGAAGA GATGGTATGT GGTATTGAAC ATCATATGAA TAAACAGTTT ACTGATGCAC TTTGTACAAT GTTAAAACAC CCTAGAACAT CGCCACATGG TAAAGAGATT CCAATGGGTG AATGTTGTAA ATCAGCTTCA TAG
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Protein sequence | MDVLDEETLF VGTAEAEHVE MYLKAIWLLK ERGEEVKIST IAKMLNVRQP SVVQMLKKLN AKNLVTYNKA GVRLTDEGQT IGSSMMRNSR LLEVLMDSAL KVDIDEEMVC GIEHHMNKQF TDALCTMLKH PRTSPHGKEI PMGECCKSAS
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