Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0095 |
Symbol | |
ID | 5774000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 83839 |
End bp | 84402 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641315714 |
Product | GrpE protein |
Protein accession | YP_001581433 |
Protein GI | 161527607 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0826396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAATG ATAATGAATC GGATGAAATT CCTGTAAATG TTGTAACTGA GAATAAAGAT GATGAACCTA AAAAAGAATC TGAATCTTTA GAAACAGTTC AAGAAAATTT TTCAGAGTTA TTGGATGCAG AAAAACAAAA AACTTCAGAA TGTGAAGAAA AATTAAAACA TATTTTAGCC GATTTTCAAA ATCTTACTAG AAAAACACAA TCTGACATTC AAAATGGTGT TAATGCTAAA GTTGATGAAT TTCTATTAGA TTTTCTAAAA ATCTATGATG ATTTCATTCG TGCTAGAGAT GTATTTTCTG AAAATAAAAT CAACACTGAA GGTCTTGATT CAATTTTAAA AAATATGGAT TCTTTATTGA AAAAATATAA TGTAACTGCA ATTGATGCGT TGGGGGAAAT TTTTGATCCT AATCATCACG AAGCTATATC TGTAATCACT GATCCTGATT TAGATGACAA TACAATTACC AAAGAGATCA GGAAGGGATA TATTTCTCAA AACAGAGTCA TAAGAACAAC ATTAGTAGAA ATTTCAAAAA AGGATGATAA TTAA
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Protein sequence | MSNDNESDEI PVNVVTENKD DEPKKESESL ETVQENFSEL LDAEKQKTSE CEEKLKHILA DFQNLTRKTQ SDIQNGVNAK VDEFLLDFLK IYDDFIRARD VFSENKINTE GLDSILKNMD SLLKKYNVTA IDALGEIFDP NHHEAISVIT DPDLDDNTIT KEIRKGYISQ NRVIRTTLVE ISKKDDN
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