| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0030 |
|---|
| Symbol | |
|---|
| ID | 5774204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 24466 |
|---|
| End bp | 25470 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641315647 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001581368 |
|---|
| Protein GI | 161527542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATAATT ATCTAATATT TGGCTTTATT CTGTCAGCCA TTTTCATCCC TATCACTTCT
TATGCAGACA ATGTTGAATT AGAAATATCT GCACCAAAAA TTGTTGATAG TACTGGTAAT
ACTGTAAACG AGATTTTTGC TCCACTAAAT GGGGTACCTT TTGCCTATCA ACCATCTGCA
ATACTGCAAA ATACTGGAAC ATCTCCAATA GATTTTACCT TTTATGCTAT GGTTGATGAT
GGAAATGAAC TATTGGAACT TAGTTCCTTT TCAGCATCAA TAAATCCTAA TCAAGACTTT
ACACTTGCTT TGACATGGAA TCCACAAAAA GAAGGCAAAC ATACACTCAT TTTTGGAGTG
TGGAATAATC TTGGAGAAAA AAATGATCTA ATTACGCCAA TTGAATTAGA TGTAAATGTA
TTATCAAAAG ATTCTTCAAC CAATTCTATT CAAATCGCAT CATTTGTTGA TCCTACCAAA
GATCCACAAA GCTACATTGA CAGATACAAC AATGAAGAAT CATACAAAGA ATGGTTTGAT
GAAAATTATT CGCAATATGA TTCCATAGAG CAGGCAGTAG GGTTGCCGGA AGCATTAAAA
GAAAAAGTAC CGACATGGGT AAAAAATAAC GCAAAATGGT GGTCTGAAGG AAATATTGAT
GATGACACAT TTGTTAGTGG TGTCCAATTC TTAATGAAAG AAAAAATTGT AAATATTCCT
GACTTACCTG AACAATCTTC AGAAAAAACA AAACCAACTT TTGTAGATGA AACCAAAGAT
CCACAAAGCT ACATTGACAG ATACAACAAT GAAGAATCAT ACAAAGAATG GTTTGATGAA
AATTATCCTG ACTATACTAT TGAGGAAGCA GTTGGAATAT CAAAACCAAT TCCTGGATGG
ATAAAAAATA ACGCTGATTG GTGGTCTGAA GGATTAATTT CTGAAGATGA ATTTGTTAAA
GGAATTGAAT TTCTAGTAGA AAATAGAATT TTAATTGTAA ACTAG
|
|---|
| Protein sequence | MNNYLIFGFI LSAIFIPITS YADNVELEIS APKIVDSTGN TVNEIFAPLN GVPFAYQPSA
ILQNTGTSPI DFTFYAMVDD GNELLELSSF SASINPNQDF TLALTWNPQK EGKHTLIFGV
WNNLGEKNDL ITPIELDVNV LSKDSSTNSI QIASFVDPTK DPQSYIDRYN NEESYKEWFD
ENYSQYDSIE QAVGLPEALK EKVPTWVKNN AKWWSEGNID DDTFVSGVQF LMKEKIVNIP
DLPEQSSEKT KPTFVDETKD PQSYIDRYNN EESYKEWFDE NYPDYTIEEA VGISKPIPGW
IKNNADWWSE GLISEDEFVK GIEFLVENRI LIVN
|
|---|
| |