Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1613 |
Symbol | |
ID | 5758462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1762975 |
End bp | 1765467 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641302802 |
Product | polysaccharide export protein |
Protein accession | YP_001568630 |
Protein GI | 160903049 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG GTAGCTTTAT TATCATTCTT TTAATTCTTT TGGCTTTACC AATTATTACA TTCTCATATA ACGTAAGGAT GGGTGACATC TTAGGAATTT GGGTCTTAGG ATATCCTGAA TATTCAATAA CCGATGCAAT TGTGGGGCCA GAAGGAGACG TCACGGTACC TCCTATTGGC AGAATAAAAG CAGAAGGTAG AACTTTAGAA GAAATTGAAA ACGAGATATC CACTAAAATG GAAAGTTACA TAAAAACTAA TAAAGTTACA GTAGGAATCA CCCAGTATGC CCCTTTTTCG GTAACGGTTT TAGGAAACAC CAACATAAAC GGGGTCATTA ACATAAAAAA CGAAAAGATT AAACTTTCAG ATCTAATTGG ATTAGCTGGT GGGATAAAAG ATATCACTAA CTCCTCTTAT GCGTTGATCA AATCTCCCGA TGGAAAGGAA CAAAAAGTTA ATATCGAATG GATCAAAAGT GGAGAACCTG GTGAAGATCC TTATATATAT GAAAATTACT TTATTCTCTT CCCCTACGAC TATACGAACA AAATCACTGT TTTTTCAGAC TTCGGCACGT CATCTTTAGA TTACTATGAA GGTTTGACGT TGAAAACCGT CATCTCTTCC ATGAATATAC CTACTAACAA GATGCCTGCT GAAATTATGA TTGTTCGAGA GGGAAAAATT CAAGAAGTCC CATTTGATGA AATAGTAAAA AAAGAAGATT ATTCCTTACA ACCAGGCGAC ACAGTAATAA TTCCTTACAA CTATACTAAT AATGTTCTTG TCTTTTCTGA TTTTGGATCA GCTTCTTTAG ATTATTTTGA AGGCATGGGA ATAAAATCTG TAATAACGTT ACTTAACGTT AGTCTAAGCG AAGTAGAAGA CTCTGTAACA GTTGTTAGAG AAGGAGAAAC TACTACTTTA TCTTTACAGA AAACAACCAA CAATGAAGAT TTTTTTCTTC AACCTGGCGA TACAGTAATA ATAAACAGAT TTGAAAATTA TGTATACTTA AGTTCACAAG AAAATTCACA AAGAGTTGAC TTTGAAAAAC AAGAAAGAAT GAACATCAGA ACACTCTTAA CTAAAGTTGG TATAAGTGAA GAAAATGTGG AAGAAGTTCG AGTAAACAAC CAACCCGTAA ATTCGAATAC TGAGCTAAAA AAAGGTGATT TTGTTCAAAT TACACTTAAG AGAAACTATG TTTATCTAAG TGGAGCATTC AACAGAACTG GAAAGGTTGA ATTTTTGCCA AACGAAAAAA TAAGGATGGA TAAGATAGTT GGATTAGCAG GTGGTTTCAG TAACAATTTT TCAGGAAACT TGGTTATCGT GGATAATTCT GGAAGTACAA AAAGTTTAAC CGTTGATCCG AATAACTTAA CTATGTTGAA AGATGTCTTA GTAAGTTCTG GCTCAACGAT AATAGCCGAC ACAGAATTAA GAATGGCTTA TATATTCGGA GAATTCTCTA ATGTTATGGC CTACAATCAA GGAGAAAGTT TGTATGAACT ACTGCTCCCA TTAAACTTAG ATGAATCCTA CCAAGTTAGA TATCAAATCG GTGAAAAAAC CGGAACTTCA ATAGCGAATG AATTTGACAG TTTAAAAAAT ATTCTACTCG AAGGCAAGGC CTTTGTAGAG ATTTCAAAAA TTGCTCCAGA CCAAATTATC GTCTACAAAG CAGGAGAAAC ACAAGTTATT CAGCAAAAAA ATGTAAGGTT AATAGATGTC TTCTCGTCTG TAAATGGGTT CTCCCCAGTA GATACTGGAA CAATAGCAAT CTACCAAAAC AATGAAAAGA TAAAAACAAT AAATTCTGAA GAATTATTGA ACAATTTAAT GATGGAAGTT CCAAAAGGTT CATACGTCGT TGTTCAACCA GAAGTGAGTG GTTCATACAT AGCTGTTTTG GGAAATATCT CTCCAAAAAG TCTAAGAACA GATGTTCCAA TGAGCTTGGT TGAGATACTT TCTAACTCCG CTATCGATTG GAAAAACCAA GAGAGCATCT TCATCTATAC AAAAAACAAC GAGGAAATAA AAGTGGATAT AAAAGACGTT GAATCACTAA GAAATGTACT TGTTAACCCT GGATCCATAG TCTACGTACC ACCGGCAGAA GAGCAAGTTG TTTACGTCTT TGGAGAAGTA ACAAAACCCG GTATTATCCC ATACAATGCA GGCATGACAG TGCTAGACGC AATACTCAAA GCAGGAAACG CTTCTCAATC AGCTCAATTA ACAACGGTAT ACTTATTCAA AGATGGTCCG GAAAATCCAC CTGTAACTTT GGACTTATCT GGAATAATAA ACGCAGCCCC TGTAAAAACC GGGATGAACC CAGAAGTAAA ACCAAAAGAT ATTATCTATA TTCCAAAAAA CACACTCACC AACATCGTAG AAGTTATGAG TACGGTACAA ACATTCATGA GTTTTATTAA CGCCGGCTTT GACACATACG CTAATGTATC TGGTCTGTTT TGA
|
Protein sequence | MKKGSFIIIL LILLALPIIT FSYNVRMGDI LGIWVLGYPE YSITDAIVGP EGDVTVPPIG RIKAEGRTLE EIENEISTKM ESYIKTNKVT VGITQYAPFS VTVLGNTNIN GVINIKNEKI KLSDLIGLAG GIKDITNSSY ALIKSPDGKE QKVNIEWIKS GEPGEDPYIY ENYFILFPYD YTNKITVFSD FGTSSLDYYE GLTLKTVISS MNIPTNKMPA EIMIVREGKI QEVPFDEIVK KEDYSLQPGD TVIIPYNYTN NVLVFSDFGS ASLDYFEGMG IKSVITLLNV SLSEVEDSVT VVREGETTTL SLQKTTNNED FFLQPGDTVI INRFENYVYL SSQENSQRVD FEKQERMNIR TLLTKVGISE ENVEEVRVNN QPVNSNTELK KGDFVQITLK RNYVYLSGAF NRTGKVEFLP NEKIRMDKIV GLAGGFSNNF SGNLVIVDNS GSTKSLTVDP NNLTMLKDVL VSSGSTIIAD TELRMAYIFG EFSNVMAYNQ GESLYELLLP LNLDESYQVR YQIGEKTGTS IANEFDSLKN ILLEGKAFVE ISKIAPDQII VYKAGETQVI QQKNVRLIDV FSSVNGFSPV DTGTIAIYQN NEKIKTINSE ELLNNLMMEV PKGSYVVVQP EVSGSYIAVL GNISPKSLRT DVPMSLVEIL SNSAIDWKNQ ESIFIYTKNN EEIKVDIKDV ESLRNVLVNP GSIVYVPPAE EQVVYVFGEV TKPGIIPYNA GMTVLDAILK AGNASQSAQL TTVYLFKDGP ENPPVTLDLS GIINAAPVKT GMNPEVKPKD IIYIPKNTLT NIVEVMSTVQ TFMSFINAGF DTYANVSGLF
|
| |