| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1430 |
|---|
| Symbol | |
|---|
| ID | 5758009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1535619 |
|---|
| End bp | 1537913 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641302622 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001568456 |
|---|
| Protein GI | 160902875 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0145325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTATT ATGAAGTAAT CCCCATAGGA CAAATGGTTT TTAATGGGTT TACCTATAAA
AGCGATAAAA AATTAGAGAT AGGTCAAAGA GTTATCATTG ATTTAAGAGG TAAGTTCCTT
CCTGGTTTAG TTTACAAAGA GTCTGAAACT ACAGAATTCG ACAAAATAAA AGAAATCGCA
TTTCCATTGG ATAATAAGAG TTTTTTAAAT GAAAAGCACA TCAAACTTAT GGAAAAGGTA
AGCTCAAAAT TTATGGCTCC TATTGGGGAG GTTGCAAGAT TGTTTTTTCC TCCTCTTTCT
TCGGATATTT ATAAACTGAG AATTACACCA AAAAGTTCTT TTTCTCCTAT TCAAAAGCCT
ATTTTTTACA AGCAATTTTT AAAATCTTTT GATAATGCTT CAAAAGCCAA CAAGCAGTTA
AGAGAATATT TAGATTCAAA TTTAATTGAG ATAGAACTAT ACAGAAAAGA AATTACAAAG
AAAATAGATA AGTTTGTTAG CCTAAAAATG GACTTAAAAG AGATGTGGAA GTTCAATGTG
TCAAAATCTG CCAGAGAGGT AATAAATTAT CTATCCATAA ACGGTGAAAC CTTAGAAAGC
GATCTGTACT CACAAGGTAT TTTGAAAAAA GGTTCCACCG TTTTGAACAC TTTATGGAAA
AAAGGTATAA TTGAATTATC TGAAGGTTTC CCAATTTACG AAGAAAATAC AGAAATTTCT
TTAAATGATG AACAGAGGCA AGCAGTTGAA GCAATAAAAG CAAATTCTGA TAAACCACAT
TTATTGTATG GGGTTACGGG GAGCGGTAAA ACAGAAGTAT TTTTTGAAGT TGCAAGGCCT
ATCTTGGAAA ATGGCGGGAA AGTCCTTCTT TTAGTGCCAG AAATCTCTTT AACCTCGGAG
CTAATGATCA GGTTAAAAAA ACGATTTGCT AACTACAATG CAGCGTTTTA CCATTCCGGA
CTTACAAGTA GCGAAAGAGT ACAAACTTGG TACAAAGCCG TGAATGGTGA ATTGGACTTA
GTCATAGGAA CAAGAAGCGC CATTTTCATA CCCATGAAAG ATTTAAAAAT GATTATAATC
GATGAAGAAC ATGATCAATC TTACTATCAG ATAGAAAACG TTAGTTACGA TGCGATAGAT
ACGGCTTGTT TTAGAAAAGA TTTAGAAGAC ATTCAACTGA TACTTTCATC AGCAACACCA
CGGGTGATTG ATCTGTACAA GGCAAAAGCG AACTTTTTTT ATCTTGAAAA AATACATACA
AGGTACTTTA CCGAAATGCC TGAAGTCCAA ATAGTTGATA TGAAAAAAGA TGAAAAATAT
AACTGGATAT TCAGCAAAAA GGTAGTAGAA AATATAGAAA TTTCTTTGAA AAAAAACAAA
AAAGTAATTG TTTTCACGCC AACAAGAGGA TATGCCAATT ATGTAATTTG CAGCGACTGC
GGATATATAT TCAAATGTGA TGAGTGTGAT GTTTCATTAA CCTTTCATAA AAATGAAAGA
AAATTAAGAT GCCATTACTG TGGAAAGGAA AGTGAATTAC CAAATTTTTG TCCAAAGTGT
GGAGGCTTTA AACTTCAAAC AAGAGGTTTC GGTACGGAAC GGGTTATGGC TGAATTGGCT
AAATTGTTCC CTTCACAACC TCTAGTAAGG GTTGATAGGA CGGTTATAAA AACATTCAAA
GATTTACGAA ACACTTTTAA TTTCATGAAA GAACCAGGGA AAAAGATCGT TGTTGGAACT
AAGATGATCA CTAAAGGTTT GGATATTCAA GATTTAGATT TAGTAGTCAT TCTTGACGCT
GACAGATATT TCAACTTTCC TGACTACAAC GCTCAAGAAA GCACAGCCTC TTTGCTGATG
CAGGTTGCAG GAAGATCTGG CAGGAAAGAG AAAGGCAAAG TTATCATTCA GAGTTTTCAA
CCAGAGAATC ATATTTATAA ATCTTTAATT GATCATAATT TTGACCTAAT TGCAGAGAAT
GATCTTGAAC AAAGGAAAAT ATACGGATAT CCTCCGTTCG TCACATTATT TATGATTTTA
GTGAACAACC CTTCCGCTGA CAAAGCAAAG GCTAAAGCAA ATGAAATCGT CGAAGAGTTG
AGTAAAATTG AAAATCAAGT TGATATTGAA ATATTGGGAC CCGTTGTGCC AATCATTTCC
AAATTAAGAG GGAATTACAG GTATCAAATC ATTATAAAAA GTAAACAGAA AAATCATGAC
TTTTTATACT CAACGCTTAA AAAACATTTT AGAGACATCA AAATTTATGT TAATCCCCCC
ACTACGTTAG TATAA
|
|---|
| Protein sequence | MYYYEVIPIG QMVFNGFTYK SDKKLEIGQR VIIDLRGKFL PGLVYKESET TEFDKIKEIA
FPLDNKSFLN EKHIKLMEKV SSKFMAPIGE VARLFFPPLS SDIYKLRITP KSSFSPIQKP
IFYKQFLKSF DNASKANKQL REYLDSNLIE IELYRKEITK KIDKFVSLKM DLKEMWKFNV
SKSAREVINY LSINGETLES DLYSQGILKK GSTVLNTLWK KGIIELSEGF PIYEENTEIS
LNDEQRQAVE AIKANSDKPH LLYGVTGSGK TEVFFEVARP ILENGGKVLL LVPEISLTSE
LMIRLKKRFA NYNAAFYHSG LTSSERVQTW YKAVNGELDL VIGTRSAIFI PMKDLKMIII
DEEHDQSYYQ IENVSYDAID TACFRKDLED IQLILSSATP RVIDLYKAKA NFFYLEKIHT
RYFTEMPEVQ IVDMKKDEKY NWIFSKKVVE NIEISLKKNK KVIVFTPTRG YANYVICSDC
GYIFKCDECD VSLTFHKNER KLRCHYCGKE SELPNFCPKC GGFKLQTRGF GTERVMAELA
KLFPSQPLVR VDRTVIKTFK DLRNTFNFMK EPGKKIVVGT KMITKGLDIQ DLDLVVILDA
DRYFNFPDYN AQESTASLLM QVAGRSGRKE KGKVIIQSFQ PENHIYKSLI DHNFDLIAEN
DLEQRKIYGY PPFVTLFMIL VNNPSADKAK AKANEIVEEL SKIENQVDIE ILGPVVPIIS
KLRGNYRYQI IIKSKQKNHD FLYSTLKKHF RDIKIYVNPP TTLV
|
|---|
| |