| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1408 |
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| Symbol | |
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| ID | 5756806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | + |
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| Start bp | 1511747 |
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| End bp | 1514671 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641302600 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001568434 |
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| Protein GI | 160902853 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAGAA AAGAACTTAT AAATTTTCTA GATTCGCTAA AAAAAGTTAA CAAACAAAAA
ATTTTAGTTT TACCTGATGG ATATCTCCAA GATTTTGACG ATGAGGAAGA GGTTTTCATT
TATCCAGATT TTGACATATT TCCATTTGAA AATCTGGATA TCTCTCCAAA TATCAAAGCA
AAGAGAATGA AAACGTTACA TGCCTTATTA ACGAAAGAGA ACGTGACCGT TTTAACTACC
TTTTCATCCT TAATAAGGTA CACCTTGCCT AAAAACGAAT TTGTAAGCAA AAAGATCAAA
GTTGGAGATA CGTTCGATCT TGATCATAAC GTTCCTTACC ATTTAGGATA CAATCTTTCA
GAAGAAGTAA CTAGTCCCGG AGAATATTCT AAAAGAGGTT TTGTCAGAGA CTTTTTCATT
CCAATTTACG AACAACCGGT TAGAATAGAG TTATGGGATG AAGTAATAGA TAGAATATCC
TTTTTTGATT CTTATTCCCA AAGGTCTATT GAAAATTTAA AAGAAGTTGA GATAATTCCA
GGATCTGAAA TTATGAAATT TGATCACAAC TTAGAATTTT ATGAGGAGAG ATTAAAAAAA
TATCTTAATG GGACAAATGA AGAAGAGTTT CTGACTCTCG ACCAATTCAA TACCCTTCCG
GGAATCTTTT ACAAAGATAA AAACACAATA TTTAGTTATC TTAATGAAGA TGGAGATATT
TATTTAATCA ACAAAGAAGA AATCATAAAC TCTTACTCTG AAAAAGAAAA AGAAAATTAT
GAAATGTGTG ACACTGAACT AAAACGAAAA ATATATAAAA TGTTTTCTGG ACATAACCTT
GAAATTTTAA ACAAAATAAA ATATGAAGAA GTTAAACTTA CCTTAGAAAA GATTTATTTT
ATAAAATCCA AAAAGGAAGA TAAAAGGTTA GAGTATATAC CTCTTCTTGA TTGGGAAGAT
CTAAACGATG GGGACTTGGT AGTACACGAA GATTATGGGA TAGGAATATA CCATGGTGTT
AACAAAGTTG AGACTCTTTT GGGTTTGAGA GAGTTTGTAA CATTAGAATA CTCCGATAAT
TCAAGGGTAT ATGTCCCAGT AGGTAGGTTA GACAAACTAT CTAAATACAT CGGAGACCCA
GAATCCGTTA AAATATCTTC TTTGAACAGT AAAAGCTGGA AAAATACAAA GCAAAAGGTA
AAAGAAGAGA TTAAACAAAA GATAGAAGAG CTTCAAAAGA TCTATGCCTT AAGGGAAAAT
CAAAGAGGAA TACAACTATT TGGAGATCCT GAATTGGAAG AAAAATTCAA AGAAACCTTT
CCTTACGTCG AAACACCTGA CCAAGAAAAA AGTATCAAAG AGGTTATGAG AGATCTAGAA
AGTGAAAGAC CGATGGATAG ATTGTTGTCA GGTGATTCGG GATTTGGTAA AACTGAAGTT
GCAATGAGAG CAGCTTTCAG AACGGTTGTT TCAAATTACC AAGTGCTATT ATTAGCTCCT
ACAACGATAC TTGCCAAGCA GCATTACGAA AATTTCAAAC AAAGAATGGA CTCTTTTGGA
ATTAAGATAG CTTTAGTTAC CCGTCATAAA ACTCAAAAAG AAAAGAAAGA CCTCTTTGAA
AGTATAGGAA AAGGTCAAGT AGATATAGTA ATAGGGACGC ACGCCTTATT ATCAGATTTA
TTGCAGGTAA AAAACCTGGG ATTAGTTATA GTAGACGAAG AACAAAGATT TGGTGTACTT
CAGAAAGAGA AATTCAAAAA GTTAAGTGAT GGAGTAAACT TCCTTATGAT GAGCGCCACT
CCTATACCTA GAACCTTATA CATGTCTATC AGCGGCTTAA GAGACATCTC CACGATATCG
ACGCCGCCTG TGGGTAGGTT ACCCATTCAA ACATTTATTG GGAAATACTC AGATAAGTTA
GTACGCACGG CTATTTTGAG AGAAAAATCT AGGGGTGGAC AAGTAATCTA TATTCACAAC
AGAGTTCAGG AATTGAATGA ACTGCATAAA AAATTGCGAA CACTTATTCC AGAAATAAAG
ATAGCAATGG TTCATGGCGG GACACCAAAA AAGGAGTTTA TAAAATCTAT AAACGATTTG
TATGATGGAA ATATTGATCT CCTTCTTTCG ACAACAATAA TAGAAAATGG AATAGATATA
CCCAATGTCA ATACCCTTAT CCTAGATGAC CCAGAAAGGT ATGGGATCTC TCAGTTGTAT
CAAATTAAAG GAAGAGTTGG AAGATCTAAC AGAAGAGCTT TTGTCTACTT TCTATTTAAA
AAAGAAGTTA CCCCTCAAAC CAAAAAAAGG CTGGAAGCAA TCAAACAGTA CAATGAACCA
GGAAGTGGAT TAAAGCTTGC TTTGAGAGAT TTAGAAATTC GTGGATACGG GGATATATTG
GGAATAGAGC AAAAAGGTCA TATTAACGCG ATAGGCTATC ATCTATACCA TGAAATGTTG
AATAAAATTT TATTTGAATA TGGCATTAAA AAGGAAGAAG AAATTCAAAA ACCTCAAACT
TACACAGAGA TAAAAGGTAT AAAAGGTTCC CTAGTTATTC CAGAATCATA TATTTCTAAT
TCTATTGAAA GAATGAGAAT ATATAGAAGA ATATCGGTGG CTAAAACAGT TGATGATGTT
GAGGATATAA GGTCTGAAAT ACGCGATAAA TACGGTAAAT TTCCAGAAGA AGTTGAGAGA
TTGTTTCAGT ACGCTTTGAT AAAAGTTAAA GCCAATATGG AAGGCATTAA AGAGATAGAA
ATAGGAGATA CTTACATATC TTTTAAATTC GAAAATGATG TAAATCCTGT CATTGAAAAG
TACAACAAAT ATTCAAGAAA GATTACCTTT TATCCAGAAA CGAAAGAACT CATTAGTTAT
GGGCCAAAAG ATCATATGAA ATATATGGAA AAGGTTTTTT CTTAA
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| Protein sequence | MIRKELINFL DSLKKVNKQK ILVLPDGYLQ DFDDEEEVFI YPDFDIFPFE NLDISPNIKA
KRMKTLHALL TKENVTVLTT FSSLIRYTLP KNEFVSKKIK VGDTFDLDHN VPYHLGYNLS
EEVTSPGEYS KRGFVRDFFI PIYEQPVRIE LWDEVIDRIS FFDSYSQRSI ENLKEVEIIP
GSEIMKFDHN LEFYEERLKK YLNGTNEEEF LTLDQFNTLP GIFYKDKNTI FSYLNEDGDI
YLINKEEIIN SYSEKEKENY EMCDTELKRK IYKMFSGHNL EILNKIKYEE VKLTLEKIYF
IKSKKEDKRL EYIPLLDWED LNDGDLVVHE DYGIGIYHGV NKVETLLGLR EFVTLEYSDN
SRVYVPVGRL DKLSKYIGDP ESVKISSLNS KSWKNTKQKV KEEIKQKIEE LQKIYALREN
QRGIQLFGDP ELEEKFKETF PYVETPDQEK SIKEVMRDLE SERPMDRLLS GDSGFGKTEV
AMRAAFRTVV SNYQVLLLAP TTILAKQHYE NFKQRMDSFG IKIALVTRHK TQKEKKDLFE
SIGKGQVDIV IGTHALLSDL LQVKNLGLVI VDEEQRFGVL QKEKFKKLSD GVNFLMMSAT
PIPRTLYMSI SGLRDISTIS TPPVGRLPIQ TFIGKYSDKL VRTAILREKS RGGQVIYIHN
RVQELNELHK KLRTLIPEIK IAMVHGGTPK KEFIKSINDL YDGNIDLLLS TTIIENGIDI
PNVNTLILDD PERYGISQLY QIKGRVGRSN RRAFVYFLFK KEVTPQTKKR LEAIKQYNEP
GSGLKLALRD LEIRGYGDIL GIEQKGHINA IGYHLYHEML NKILFEYGIK KEEEIQKPQT
YTEIKGIKGS LVIPESYISN SIERMRIYRR ISVAKTVDDV EDIRSEIRDK YGKFPEEVER
LFQYALIKVK ANMEGIKEIE IGDTYISFKF ENDVNPVIEK YNKYSRKITF YPETKELISY
GPKDHMKYME KVFS
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