Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1388 |
Symbol | |
ID | 5758024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1494504 |
End bp | 1495136 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641302581 |
Product | endonuclease III |
Protein accession | YP_001568415 |
Protein GI | 160902834 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.212617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAGAG ATATAAAAAA AGAAGCAGAA AAGATCATAA ATATGTTTCC ACGTAGTAAC TCTGAAACGG ATCCTTTTAA GGTTTTAATT GAAACGGTGC TTTCTCAAAG AACAAAAGAT GAAAATACTG AAAAAGCTTC TAAATCACTT TTTTCTTGCT ACACAAATGT TTTTGAGATT TCTAAATTGA ATCCGCAGGA CCTATACGAT CTAATCAAGC CAGCAGGTAT GTACAAACAA AAATCAGAAA GAATTATTAA TATTTCTAAA ATTTTAATTG AAAAGTATAA TGGGAAAGTA CCTGATGAAT TAGAAGAGTT GATTGAGCTT CCTGGAGTGG GAAGAAAAAC CGCTAATATA GTTTTGTACG TGTCTTTTGG TAAAGAAGCA CTTGCAGTTG ACACGCACGT ACATAGAATA TCTAATAGAC TCGGTTGGGT GAAAACAAAG ACACCTGAAG AAACTGAAGA ACAATTGAAA AAAATTATCC CGTCTGAATT GTGGGGACCT CTGAATGGTT CAATGGTGAA TTTTGGTCAA AAGATTTGTA AGCCAATTTC TCCAAAGTGC GACGAATGTT TTTTGAATGA AGTCTGCCCT GCAAAACAAA TATATAAAAA CAAAAGCCGG TAA
|
Protein sequence | MQRDIKKEAE KIINMFPRSN SETDPFKVLI ETVLSQRTKD ENTEKASKSL FSCYTNVFEI SKLNPQDLYD LIKPAGMYKQ KSERIINISK ILIEKYNGKV PDELEELIEL PGVGRKTANI VLYVSFGKEA LAVDTHVHRI SNRLGWVKTK TPEETEEQLK KIIPSELWGP LNGSMVNFGQ KICKPISPKC DECFLNEVCP AKQIYKNKSR
|
| |