| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1244 |
|---|
| Symbol | |
|---|
| ID | 5756660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1332387 |
|---|
| End bp | 1333754 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641302448 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001568283 |
|---|
| Protein GI | 160902702 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAG AATCAGTTGA ATCTCATACA ACCGAATTCA AGTCCTCATG GCGGGACGAA
TATCTAAAAT GGATTTGTGC CTTTGCAAAT ACCGATGGCG GAAGATTGCT TATCGGAGTT
GATGATAATG GTAAGCCTGT TGGCGTCGAA GACTCTAAGA AATTACTTGA GGATTTACCC
AATAAATTAA GAGATACCCT TGGCATTATA CCAAGTGTCC GATTAGAAAA GGAAAACGGT
AAGGAAATAA TTATAATAGA AGTTGAGCAT TCCTATGTAC CAATTTCATA TCATGGGAGA
TTTTATGTTA GAAGCGGAAG CACAATTCAG GAACTAAAAG GCAAGGACCT GACCAGGTTT
CTAATATCCA ACTCAGGCAA GCACTGGGAA GAGTATATTG AGGAAAATGC TTCTATTGAG
GATATAAATA ATGAGACAAT TGAAAAACTC AAACAAATCG CGATAAAAAG AATTCCACTT
GTGAAAGATG AAAATGAGCC GATAAAGGTG CTTGAGAAAT TAAATTTGAT TAAAAATGGT
AAATTAACAA GGGCTGCCCT TTTACTATTC GGTAAAAATC CAAAAAGATT CTGGACAAGC
TCCTATATAA AAGTGGGTAA ATTCTTAACG GATACTGATA TTATAAGTTC TGATGATATT
GAAGGAAATC TCTTTGAACA GGTTGAAAAA ACAATGGAGT TATTGCGGAC TAAATATCTT
ATATCTGAAA TAAGATTTGA AGGAATTTAT CGTAAAGAAG AACTTGAATA TCCAGAAGAA
GCATTGAGAG AAGCCATAAT TAATTCGGTT ATACATAGAG ATTATATCGG TCCACATACC
CAGTTAAAAA TTTATCCTGA TAAAATAATT CTTTGGAATG TTGGCACACT TCCAAAAGAA
ATCAAGGTTG ATGAATTAAA GAAAAACCAT TCATCTTATC CAAGAAATGA GTTATTGGCA
GATGTATTTT TCAAAGCTGG ACTAATAGAG GCTTGGGGCA GAGGAACAAT AAAAATTACA
GATGAATGTA AAAAAGCTGG ACTGCCAGAA CCAGAATTTA AAGAAGAGTT TGGCGGTTTT
GCAGTTTATT TCTATAAAGA CATTTATACA GAAGATAATT TAAGAAAAAT GGGGTTAAAT
GAAAGGCAAA TAAAAGCTGT AAAGTATGTA AAAGAAAAGG GAAAGATTAC GAATAAGGAA
TATCAAGAGT TAAACAAAAC ATCAAAACCA ACAGCGACAA GGGATCTTCG CAATCTTGTT
GATAAAGGAA TAGTTATAAT GCAGGGGGAA GCTAAAAGAC AAATATATTA TCAATTGAGC
CAAAAAAGAG CCAATAATGA GCCAATTGAG CCAAAAAAGA GCCAATAA
|
|---|
| Protein sequence | MDLESVESHT TEFKSSWRDE YLKWICAFAN TDGGRLLIGV DDNGKPVGVE DSKKLLEDLP
NKLRDTLGII PSVRLEKENG KEIIIIEVEH SYVPISYHGR FYVRSGSTIQ ELKGKDLTRF
LISNSGKHWE EYIEENASIE DINNETIEKL KQIAIKRIPL VKDENEPIKV LEKLNLIKNG
KLTRAALLLF GKNPKRFWTS SYIKVGKFLT DTDIISSDDI EGNLFEQVEK TMELLRTKYL
ISEIRFEGIY RKEELEYPEE ALREAIINSV IHRDYIGPHT QLKIYPDKII LWNVGTLPKE
IKVDELKKNH SSYPRNELLA DVFFKAGLIE AWGRGTIKIT DECKKAGLPE PEFKEEFGGF
AVYFYKDIYT EDNLRKMGLN ERQIKAVKYV KEKGKITNKE YQELNKTSKP TATRDLRNLV
DKGIVIMQGE AKRQIYYQLS QKRANNEPIE PKKSQ
|
|---|
| |