Gene Pmob_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1054 
Symbol 
ID5756849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1121523 
End bp1123271 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content35% 
IMG OID641302262 
ProductABC transporter related 
Protein accessionYP_001568098 
Protein GI160902517 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0245689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA CAAACTTGCG TAAGATAATA TCTTTTTATT CTTTGATTGG GAAACGAAGG 
CTTATACCCA TATTGATTGG TGGCTTTCTT GCAACATCAT CAGTTGTATT CGGTTTTTTC
ATTCCATTGC TGGTAAGAAA CATCATAGAC GGGTTAACTA TAAATATGCA AATGGAATGG
AACTCCATTT ATCTTTTAGC TATCTTATAC ACTACCTCGT TTATCTTAAC CTACATTGGC
GATCAAATTT ATTTACGTGA AAAATTCAAA GCTGCCGCGG ATCTATCAAA TCGTATTTTC
AAACTCTCTT TCTTTTTCCC TTGGAAAAAA CTTAAGCAAC AAGGTTCGGC ATACTATGCC
TCTTTGATTA ATAATCAACT TAACGAAGCT TTTGTCGTTC TTGATTATGG TTTTATTCGC
AACATTTTTG TGCTTATACG AATGGTACTA ATTTTGGTAA TGGTTTTCGC TTGGAGTAAA
TTCTTTTTCT TCTTGTATGT GGTGAATGTG GCAATTGTAG GTCTATACAC AAATATTATT
GATCGAGTAA GCCATCGCCC TTACTCCCGA GGGTATGAAT TAATGAGACA AGCAACGAAT
TTCATAGTTG AAACTTTCGA AAATCTCCAT GAAATTTTTG CTGGAGAAGC AAAATCAAAA
CGTGAAAATG AATATGAAAG AATATACCAA AAGATTACAG ACTCAGTGGT GGAAGCAGAA
ATACCAAGAT CAAGGTTTGA TAAATTGATG GTTGATCTGC CAGATTATTT TTCTCGTCTA
ATAATCTTGG TATATGGAAG TTTTTTAGTA ATTAATGGAC GTATGACCGT TGGAACAATA
TGGGCATTGT GGACATATTT TTCCTTTGTG ACGGAACCTT TATACCTATT TAGGGAATTG
GCCCGAATTG CAGTACGTGT TTCTGCAAAT CTTGATACCA TCCTTAATTA TTTCGACGAA
GCAGAACATG CACAAAAGAA TTACACGAAG CATGAAATAT TTCCGGTTCC AAAGGCTCCC
GTATATAGTC TGAAAGATGT CAGTTTTGGT TTTGAACCTG ATAAACCGTT TCTAAAAAAA
ATTTCCTTAA ACGTTCAGCA TGGGGAAACA ATTGCTATTG TAGGTTTATC AGGAGAAGGA
AAATCCACTT TACTCAATAT ACTACTTGGA TTAGAGCAAA ACTATGAAGG AGAAGTAAAA
CTCCTAGGTA ATGAATTAAA AGGGACCTAC CCCCTGGCAG TGTTCAAATA TGTTGGATAT
TACTCTCAAA CTGTTGGAAT TTTCAATGAA ACGCTTGAAA GCAATATCGT TATGGGAAGA
AAGTTAGACG AGGAACGATT GGAAAAAGTA ATCGATGATC TTAAATTGGA TCATTTAAAA
GGAAGACTTT TAGGAGAAGG AGGTAGTTTT GTTTCGGGCG GTGAAAAACA ACGGATACAA
CTTGCAAGGT TATTTTACGC TGAAAAAGAT GTAGTGGTGG TTGACGAACC ACTTACTAAT
CTAGATACCA TAAACGAAAG TATTTTACTT GAAAAACTTG AAGATTATTT ATCCACACGT
TCTGGGATTA TTATTTCCCA TAAACCAAAT GTTATTAGTC TTGCAAATAG GGTATTTGTG
TTAAAAAATG GAACGGTTGC AGCAACAGGT AGTTTTAGTG AGCTTATGTC TGGAGATGAT
ACTTTCAAAG GAATAATTGA AAGCTATCTA TCAAGTGCTA ACGAGATCGG ACGAAAGAAG
ATGGGATAA
 
Protein sequence
MNLTNLRKII SFYSLIGKRR LIPILIGGFL ATSSVVFGFF IPLLVRNIID GLTINMQMEW 
NSIYLLAILY TTSFILTYIG DQIYLREKFK AAADLSNRIF KLSFFFPWKK LKQQGSAYYA
SLINNQLNEA FVVLDYGFIR NIFVLIRMVL ILVMVFAWSK FFFFLYVVNV AIVGLYTNII
DRVSHRPYSR GYELMRQATN FIVETFENLH EIFAGEAKSK RENEYERIYQ KITDSVVEAE
IPRSRFDKLM VDLPDYFSRL IILVYGSFLV INGRMTVGTI WALWTYFSFV TEPLYLFREL
ARIAVRVSAN LDTILNYFDE AEHAQKNYTK HEIFPVPKAP VYSLKDVSFG FEPDKPFLKK
ISLNVQHGET IAIVGLSGEG KSTLLNILLG LEQNYEGEVK LLGNELKGTY PLAVFKYVGY
YSQTVGIFNE TLESNIVMGR KLDEERLEKV IDDLKLDHLK GRLLGEGGSF VSGGEKQRIQ
LARLFYAEKD VVVVDEPLTN LDTINESILL EKLEDYLSTR SGIIISHKPN VISLANRVFV
LKNGTVAATG SFSELMSGDD TFKGIIESYL SSANEIGRKK MG