| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0973 |
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| Symbol | |
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| ID | 5757685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | + |
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| Start bp | 1032767 |
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| End bp | 1034980 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641302182 |
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| Product | ribonuclease R |
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| Protein accession | YP_001568018 |
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| Protein GI | 160902437 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAG ACAACTTAGA AAAACAAATA TTAGAAATAA TAGACAAAAA TCCTACGATA
CAAAAAGAAC TATATGAAAG CCTAAATGCA CTTGAAAAAT CGGAAAAGGC TCAAATTAGA
AAAATACTAA ATAAACTCCT AAGTGAAGGG AAAATAATTA AAGATTCACA AAACCAATAC
AGAAAATTAG ATGAAAACAT GGCTGTCGGA ACTATCGAAT TCACCAAAAG TGGAAATATG
GCTTTTGTTC AATGCTCTGA TGGAAGCGAA ATTGCTGTAA AGGTTGAAAA TTCTGGAATC
AGTTTACATA AAGATTTAGT TTTGGTTGAA ATAATAGGGA AATGGCGTGA TTTAAAAGAA
GGTAGGGTAG TTAGAATATT AAAAAGAGAG TTAAAATATG TAGTGGGTGA GTTCGTAAGA
AAAGGAATTT TTGGATTCGT TATACCCATT GATGCAAAAA TAAATACAGA TTTTTACGTA
GCCCCAGAAG GTATAGGAAA GGCTAAAAAT GGTCAAATAG TGAAAGCAAA AATAACAAAA
TATCAATCTC CCACGAAAAA GCCAGAGGTC GAGATAGTCG ATGTCCTTGG GGACAAAGAT
GACCCTTCCA TTGATTTGCC AATAGTGATC TTCAAACATG GTTTACCTGA ACCTGGTTAT
TTTCCTCCAA AGGTGTTACA AGAGGCTAAA GAACTTCCAA AAAAACTTTC TGAAAATGAA
ATTAATGGCA GAAAAGATTT TAGAAAAGAA ACCATATTTA CTATCGATGG TGATACAGCA
AAAGATTTTG ATGATGCCGT TGGTATAAAA AAGTTAGATA ACGGCAATTA TTTACTTGGG
GTGCATATAG CAGATGTATC TCATTATGTG AAAAGCAACA GTGCTCTTGA TAGAGAAGCA
TACAAACGAG GTACAAGCGT TTATTTAATC GACACGGTTA TTCCAATGCT TCCATTTGAG
TTATCCAACT GGATATGTTC TTTGGTTGAA GGTGAAGATA GATTGACAAT GTCTCTCCTG
ATGGAAATTG ACCCTTATGG GAACTTGGTA AACTCAAAAA TATACAACGG AGTAATAAGA
AGTGCCAAGA GGTTGACCTA TAGAAAAGTT AATGAACTCC TATCTGACAA TTGTAGTGAA
GAAGTAAAAA AAGAGATAGA GTTTTTAAAA CCAGAGCTTG AGATGATGAG AGAATTAATG
GAATTACTTT CTGAAAAGAG AAAAGAAAGA GGTTCAATAA TCGACATAGA AAGCAATGAA
GTACACTTTG AATTCGATGA AAAGGGATAT GTAAAAGATA TCATCCCTGT GGAAAGAGGC
CTATCAGAAA AAATGATTGA AGAGTTCATG GTCCTGGCCA ACGAAACAGT TGCTTCATAC
TTTGATGTTC AAGGTTTGCC TTTTATCTAT AGAATCCACG AAAATCCGGA TCCTGATGTA
TTGCTTCAGT TACGAAATTA TCTGGACATG TTGGGAATAA ATGTAAAATT TCCTCAAAAT
ATTCATCCGA AGGTCCTACA GGAAATATTG GAAAAAACAA AGAACCATCC TTTAAGTAAA
AATATTCAGA TGATGCTTGT TAGATCTATG AAAAGGGCGT TGTACTCCGA GGAAAACGTA
GGGCATTTTG GTCTTGCTTC ATCATCCTAT ACACATTTCA CATCACCAAT AAGAAGATAT
CCTGACTTAG TGGTTCATAG ATTGTTGAAA GAGTTCATCA AATATAAAGG AACCCTTTCA
AAAAAAGAAA TAAAGAAGTA TTCCGAAATG CTTCCTGAAA TAGCTAAAAA TTCTTCTGAA
ATGGAAAGAG TCGCAGACCA AGCCGAGTGG GATCTAATAG ATATGAAAAA AGTTGAATAC
ATTTCAAGAC ATATAGGAGA AGTCTTTTGG GTGTACATAA CAGGCGTCAC AAGGTTTGGC
TTATTCGTAG AAATCCCCCA AAAGATGATA AGTGGATTGA TACATATATC AGAGTTGAGC
GATGATTATT ATATCTACGA TGAACGTGAC AATACGTTGA AAGGTGAAAG AACCGGCAAC
GTTTATAGGA TCGGAGACAA GTTACAAGCC AAAGTGGTAA GAGCGGATAA AATCGGAACT
GAAGTAGATT TTATCCCATA TACGGAAGAT GATTTTGAAA AATTGAAAAG GGAACATCCC
CATGCCAAAA TAAAAGTTAA CAAAAAAAAT AAGAAAAAAA GGAAAAAATC GTAA
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| Protein sequence | MNEDNLEKQI LEIIDKNPTI QKELYESLNA LEKSEKAQIR KILNKLLSEG KIIKDSQNQY
RKLDENMAVG TIEFTKSGNM AFVQCSDGSE IAVKVENSGI SLHKDLVLVE IIGKWRDLKE
GRVVRILKRE LKYVVGEFVR KGIFGFVIPI DAKINTDFYV APEGIGKAKN GQIVKAKITK
YQSPTKKPEV EIVDVLGDKD DPSIDLPIVI FKHGLPEPGY FPPKVLQEAK ELPKKLSENE
INGRKDFRKE TIFTIDGDTA KDFDDAVGIK KLDNGNYLLG VHIADVSHYV KSNSALDREA
YKRGTSVYLI DTVIPMLPFE LSNWICSLVE GEDRLTMSLL MEIDPYGNLV NSKIYNGVIR
SAKRLTYRKV NELLSDNCSE EVKKEIEFLK PELEMMRELM ELLSEKRKER GSIIDIESNE
VHFEFDEKGY VKDIIPVERG LSEKMIEEFM VLANETVASY FDVQGLPFIY RIHENPDPDV
LLQLRNYLDM LGINVKFPQN IHPKVLQEIL EKTKNHPLSK NIQMMLVRSM KRALYSEENV
GHFGLASSSY THFTSPIRRY PDLVVHRLLK EFIKYKGTLS KKEIKKYSEM LPEIAKNSSE
MERVADQAEW DLIDMKKVEY ISRHIGEVFW VYITGVTRFG LFVEIPQKMI SGLIHISELS
DDYYIYDERD NTLKGERTGN VYRIGDKLQA KVVRADKIGT EVDFIPYTED DFEKLKREHP
HAKIKVNKKN KKKRKKS
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