| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0886 |
|---|
| Symbol | |
|---|
| ID | 5757836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 942336 |
|---|
| End bp | 943445 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641302095 |
|---|
| Product | NADH dehydrogenase subunit D |
|---|
| Protein accession | YP_001567932 |
|---|
| Protein GI | 160902351 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.802693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC TTAAATTATA CTTGGGGCCA AATCATCCCG GAATGCACGG GAATTTCAGT
GTACATATGT ACGTTGATGG AGATACCATC GTCAGGGCAA GACCTATGCC TGGCATGTTG
CATAGAGGAT TTGAAAAACT TATGGAAAGA AGACTTTGGA TGAATAACCT CGCCCTTATA
CCAAGGATTT GCGTTCCAGA ACCTGATATC AATGAGATGG TGTACGCCAT GGCGATAGAG
GAGTTGACAG GAATCGAAGT CCCTGAAAAG GCTCATTGGA TAAGGATGAT AATCTTAGAG
CTAGCAAGAA TCGCAAACCA TCTAATGTCC CTTGGAGGAA TAGGAGGACC AGTTGGACTA
TACACTGGCC CCAATTGGGG ACTCGCAGAT AGAGATCTTA TACTGGATAT CTTTGAAGAG
ATAACCGGAG CAAGAATCTA TCATATGTAT ATAGTACCAG GTGGCGTAAG AAAGGATTTG
AGAGAGGAAA CTATTGAAAA GATAAAGAGT TTTCTCGATT ACTTAGAAAA TAGACTTCCA
GAATACGAAG ATTTGATTCT CAAGAACTCC CTCTTTCAAA GAAGAACCAA AGATAAGTTG
CTGTTACCTG CCGAGGTTGT TTGGGAGTTG GGAGTTACTG GAATAGGTAT GAGATCAGCT
GTGGGAGAAG CATACGATAT TAGAAAAGTA GACCCATACG CAAGGTATGA CCAAGTAGAA
TTTTACGTCC CCACGGCCAA TTACTCAGAT GGATATACAA GGGTTTATTT CAAATACCTC
GAAACCTATC AGAGTATAAA AATAATAAGG CAGGTACTTG AAAAAATGCC CCAAAAAGGG
AAGGTATGGA ACAAAATATC TAACGGAAGT GCCTTACGAT GGCGTGTTCC AAAGGGGCAA
GTTTACACAC ATGTCGAATG CGCAAGGGGA GAGTACGGAT ATTATATGGT TTCAGAAGGA
GAAGATAAAC CCTATAGAGT TGCTGTTAGA GGAGCGTCCT ATCCACAAGG TTTGTTGGGT
GTAGAGAAAT ATTTGCCCGG TACAAGGATA GAAGATGCAG CGCTTTGGAT GGATACAATG
GGGGTATGCC CTCCTGAAAT AGATAGATAA
|
|---|
| Protein sequence | MKELKLYLGP NHPGMHGNFS VHMYVDGDTI VRARPMPGML HRGFEKLMER RLWMNNLALI
PRICVPEPDI NEMVYAMAIE ELTGIEVPEK AHWIRMIILE LARIANHLMS LGGIGGPVGL
YTGPNWGLAD RDLILDIFEE ITGARIYHMY IVPGGVRKDL REETIEKIKS FLDYLENRLP
EYEDLILKNS LFQRRTKDKL LLPAEVVWEL GVTGIGMRSA VGEAYDIRKV DPYARYDQVE
FYVPTANYSD GYTRVYFKYL ETYQSIKIIR QVLEKMPQKG KVWNKISNGS ALRWRVPKGQ
VYTHVECARG EYGYYMVSEG EDKPYRVAVR GASYPQGLLG VEKYLPGTRI EDAALWMDTM
GVCPPEIDR
|
|---|
| |