| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0778 |
|---|
| Symbol | rplE |
|---|
| ID | 5756880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 823603 |
|---|
| End bp | 824160 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641301982 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_001567825 |
|---|
| Protein GI | 160902244 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.807556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAG TTCAGTATAT ACCTCTGAAA GACAGGTACA AAGAAGTAGT AATACCTTCA
ATGATGAAAG AATTTAACTA CAAAAACGAA TTACAAGTGC CGAAACTTGT AAAGATAGTT
GTTAATATGG GAGTTGGAGA AGGTTCCAGG AACAGAGCAG TTGTTGAAAA ACATGCCCAA
GAGTTAACGA AGATAGTCGG ACAAAAAGCC TTAATAGCCA GGGCAAAGAA AAGTGTTGCC
AATTTTAAGG TTAGAGAGGG TATGCCGATA GGTGTGAAAG TTACCTTGAG AGGATGGAAA
ATGTATAATT TCTTGTATAA ATTAAACCAT GTTGTGTTAC CAAAATTGAG GGATTTTAGA
GGGTTACCTG CCGATTCTTT CGATGGAAGA GGTAATTATA CCTTCGGAAT ACCCGAGCAA
CTAATTTTTC CGGAAATCAG GCCTGATGAT ATAAGTAGAA TTCAAGGTAT GGATATAACA
ATCGTCACCA CAGCTAAAAC TGATGAAGAA GCCAGGAAAT TATTAGAATA TTTTGGTTTC
CCGTTACAAA AAAAATAA
|
|---|
| Protein sequence | MEKVQYIPLK DRYKEVVIPS MMKEFNYKNE LQVPKLVKIV VNMGVGEGSR NRAVVEKHAQ
ELTKIVGQKA LIARAKKSVA NFKVREGMPI GVKVTLRGWK MYNFLYKLNH VVLPKLRDFR
GLPADSFDGR GNYTFGIPEQ LIFPEIRPDD ISRIQGMDIT IVTTAKTDEE ARKLLEYFGF
PLQKK
|
|---|
| |