Gene Pmob_0450 details

Gene Information

• Locus tag: Pmob_0450
• ID: 5757425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 484311
• End bp: 486188
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641301649
• Product: basic membrane lipoprotein
• Protein accession: YP_001567509
• Protein GI: 160901928
• COG category: [R] General function prediction only
• COG ID: [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGGA CCTCAAGAAG TCTCAGCAGA AGCGAGTACG AAAAAGCTAA TAGATTAGCA 
AAGAAAGACT TTTTGGCTAA TATTTCAAAA GGGAAAGAAG GATATCTGCC GTGTTTAGAA 
GATATCATCC ACAACGCTGA AATAATTAAG GAAGAAAAAC TTGGTCTTAT AGATATCCCT 
ATAGAAAGGA TCAAAGGAAC GTACTACCAT TCTCGTTCAC TATCTTTTTC TGCAAATTTT 
TATCCCTTAA TGAAAATTGA CTCAGAATTT GCAAGTAAAT GGATCAATTT GTATGAAGCT 
CATATATCTG AAGGAATAAG GGATCCTGTA ACAGCCTACG AATATTTAAA CTGGTTTTAT 
ATTGTTGAAG GGAACAAAAG GGTAAGCGTT TTGAAATATT CAGACGCTTT TTCAGTCCGT 
GGGGAAGTTA CTAGATTGAT TCCAAAATGG GATGAAAACA ATCCTGAAAT AAGGATCTAC 
TATGAATTTT TAGATTTTTA TAAAAAGACA AAAATTAATA TAATCTGGTT CAACAAAGAG 
GGCAAATTCA AAGAACTTTA CGAGTTAATC AAAGATTATA AGAAAAAAAG TGATTTTGTT 
GAGAATGAAT ATGATGAATT AGTCCATTCA GTATATCTTC TATTTAGAAA GCTATATAGG 
GAAATTGCTA AGGACACGAT TTCGCTTACT GAAGAAGAGG CTTTTTTAGA ATACCTAAAA 
AAATTTGGTT TGGAAAATGT TCCCACTATC GAAAGAGAAA TGAGCGAACA AGTCAACGAA 
TTAATAGAAG AACTAGAAGA ACGTCTAGGT AAACCATCAG AACCTTTATT CAAATTACCT 
CAGATCTTCG CAGGGAAAAC ATTAAAAGTA GCTTTTCTAT ATAACACCTC AATAGAAGAG 
TCTGCATGGA CATATTCCCA TGAATTGGGA AGAAGGTATG TTCAAAAACG TTTAGGAAAT 
GAAATAATAA CAAAGTATTT TGAAAATATT TCTGATTTAA AAACGTATGA AAAAATATTG 
GAACAACTCG AAGAAGAAAA ATTCGACCTA ATATTTTCTA CCAGTTTTGA CTTCTTACAA 
AATCAGAACA CAAAGGAACT TCAAAATGTT CGATTCATGT ATTTTTCCGG ATATCGTACT 
ACAAAGAATA TTAACACATA TTTCGGTCGT ATGTACGAAC CAAGATTCCT CTCTGGAATG 
ATAGCAGGTG CAATGACCAC TAACAATAAA ATAGGTTACG TTGCTTCCTA CGGTATACCT 
GAAGTCATAA TGGGAATAAA TGCCTTTGCT TTAGGGGCAA AGGCTGTTAA TCCAAAAGCA 
AAGATATTTG TTGGATGGAC GAATACTTGG CGCAATATAG AATATGAAAG AGACACGTCA 
GAGTATTTGA TAAATGAAAT TGGAGTGGAT GTTTTAACCC ATCATCAAGA TTCTCCGGAA 
GTTTGCAAAG TTGGAGAAGA ATACGGCGTC TACACTATTG GTTACCATAT TGACATGAAA 
GATTATGCTC CAACTACCCA TTTAACCTCT GTTGTATGGA ATTGGGGAGT TTACTACGAA 
AACATAATTA AAGATGTATT AAGAGGGTCA AATTTTTCTT TATTTAGATT GTTTTCTGGT 
TCAGAAAAGA TTGAGAACTT TTGGGGTGGA CTTAAGAGTG GAGTAGTTTG TTTGTCACCT 
ATAAGCAAAA TTGTTCCTTC TACAACAAAA AACCTTGTTG ACACTGTGAA AACGGATATT 
ATGGAAAATA GGTTTCACCC TTTCAGGGGG GGTATTTTTG ATAAAGAAGG TAATATGAAA 
GTCTCGGAAG GCAAAGATAT CTCAGACGAA GAACTAATGA AAATGGATTG GTTTGTGGAC 
AACGTTTATT ATTCTTAA 

 

Protein sequence

MYRTSRSLSR SEYEKANRLA KKDFLANISK GKEGYLPCLE DIIHNAEIIK EEKLGLIDIP 
IERIKGTYYH SRSLSFSANF YPLMKIDSEF ASKWINLYEA HISEGIRDPV TAYEYLNWFY 
IVEGNKRVSV LKYSDAFSVR GEVTRLIPKW DENNPEIRIY YEFLDFYKKT KINIIWFNKE 
GKFKELYELI KDYKKKSDFV ENEYDELVHS VYLLFRKLYR EIAKDTISLT EEEAFLEYLK 
KFGLENVPTI EREMSEQVNE LIEELEERLG KPSEPLFKLP QIFAGKTLKV AFLYNTSIEE 
SAWTYSHELG RRYVQKRLGN EIITKYFENI SDLKTYEKIL EQLEEEKFDL IFSTSFDFLQ 
NQNTKELQNV RFMYFSGYRT TKNINTYFGR MYEPRFLSGM IAGAMTTNNK IGYVASYGIP 
EVIMGINAFA LGAKAVNPKA KIFVGWTNTW RNIEYERDTS EYLINEIGVD VLTHHQDSPE 
VCKVGEEYGV YTIGYHIDMK DYAPTTHLTS VVWNWGVYYE NIIKDVLRGS NFSLFRLFSG 
SEKIENFWGG LKSGVVCLSP ISKIVPSTTK NLVDTVKTDI MENRFHPFRG GIFDKEGNMK 
VSEGKDISDE ELMKMDWFVD NVYYS