| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0424 |
|---|
| Symbol | |
|---|
| ID | 5757294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 458752 |
|---|
| End bp | 459171 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641301627 |
|---|
| Product | toxin secretion/phage lysis holin |
|---|
| Protein accession | YP_001567487 |
|---|
| Protein GI | 160901906 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4824] Phage-related holin (Lysis protein) |
|---|
| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0746936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG TATGGAACTG GGGGCAGGCG GTTTTTACTG CTATTGGCGG ATTTCTTGGC
TGGTTTCTTG GAGGGCTGGA TGGATTTTTA TATGCTCTCG TCGCTTTTGT GGCCATTGAC
TATGTGACCG GCGTGATGTG TGCCATTATA GACAGAAAGC TTTCAAGTGA AGTCGGAGCC
AAGGGCATCT TCAAGAAGGT GCTTATTTTT GTGCTGGTGG GTGTGGGACA CATCATCGAC
AGCCAGGTGC TCGTAAGCGG CGGGGCAATC CGGACAGCGG TCATCTTCTT TTACTTGAGC
AACGAGGGCA TTTCAATACT GGAAAATGCA GCACATATAG GACTGCCCAT TCCTGAAAAG
CTGAAGAACG CGCTGGAACA ACTGCATGGC CGCTCAATTG AGGAGGATGA GAAGAAATGA
|
|---|
| Protein sequence | MKTVWNWGQA VFTAIGGFLG WFLGGLDGFL YALVAFVAID YVTGVMCAII DRKLSSEVGA
KGIFKKVLIF VLVGVGHIID SQVLVSGGAI RTAVIFFYLS NEGISILENA AHIGLPIPEK
LKNALEQLHG RSIEEDEKK
|
|---|
| |