| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0358 |
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| Symbol | rplA |
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| ID | 5758471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 385895 |
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| End bp | 386605 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641301561 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001567423 |
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| Protein GI | 160901842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.235543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAAC ATGGAAAAAA GTATAAAGAA GTTTTAAAAC TTGTAGATAA ACAAAAAAAT
TATGATATCG ATGAAGCGTT AGATTTAGTA AAAAAGACTT CTTACACAAA ATTTGATGGT
ACTGTGGAAC TCCATGTGCT TTTAGGAATA GATCCAAAAA AAGGAGATCA AAACGTTAGA
GGTACGGTTT CTCTGCCTAA AGGAACAGGT AAAAATGTGA GAGTTTTAGT TTTTGCAGAG
GGAGAAAAAG CTGCTCAGGC TAAGCAAGCA GGCGCTGATT TTGTTGGCTC CGATGATTTA
ATTGAAAAAA TAAACAACGA AGGCTGGACC GATTTTGATG TGGCAATTGC TACTCCCGAT
ATCATGAGGA AAATAGGAAG ACTTGGAAAA GTGCTAGGTC CACGAGGTCT TATGCCATCT
CCAAAAGCAG GAACGGTAAC CGACGACGTA GCGCAAGCGG TTAAAGAATT TAAAGCCGGT
AAGGTTGAAG TTAGAAATGA CAGAACAGGA AACATACACA TTCCTATAGG TAAGGTTTCT
TTCGATAAAG ATGATTTAAA AGAAAACTTA ATTTCCGCTT TTGACCAGTT AACGAAGATG
AAGCCAGAAA ATTCAAAGGG AAAATTTATT AGAAAAGCTG TTATAGCTTC TACAATGGGA
CCCGGTATTA ATATCGATTT AAGCTCCTTA TCTTTATCAT CAGTTGCTTA A
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| Protein sequence | MPKHGKKYKE VLKLVDKQKN YDIDEALDLV KKTSYTKFDG TVELHVLLGI DPKKGDQNVR
GTVSLPKGTG KNVRVLVFAE GEKAAQAKQA GADFVGSDDL IEKINNEGWT DFDVAIATPD
IMRKIGRLGK VLGPRGLMPS PKAGTVTDDV AQAVKEFKAG KVEVRNDRTG NIHIPIGKVS
FDKDDLKENL ISAFDQLTKM KPENSKGKFI RKAVIASTMG PGINIDLSSL SLSSVA
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