| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0354 |
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| Symbol | |
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| ID | 5758521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 376069 |
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| End bp | 381000 |
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| Gene Length | 4932 bp |
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| Protein Length | 1643 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641301557 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_001567419 |
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| Protein GI | 160901838 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAATG TTTCTTCCTT TCAAAGAAAG ATTGCTAAGA TAAAAATAGG TATAGCTTCT
CCTCAAAGTA TATTGGAAGC ATCAAATGGT GAAGTTAAAA AACCAGAAAC TTTAAATCAC
AGAACAGGTA AACCTGAAAA AGATGGTTTA TTCTGCGAAA AGATATTTGG TCCCGTAAAA
GATTACGAAT GTGCTTGTGG CAAGTATAAA GGGAAAAAGT ATGAAGGAAC AGTATGTGAA
AGATGTGGTG TAAAGGTTGA ATCCAAAGAA GCTAGGAGAA GAAAGATAGG TCATATAGAA
TTGGCAACAC CTATTTCTCA TATTTGGTAT TTAAAGTCTT CTCCATCTAT TCTTTCCATC
ATTCTAAACA TTGGTGTGAA AGATTTAGAA AATATCATTT ACTACGGTTC AAAAAGAGTT
ATTGAAAGAG CTTATTTAAC GCTTCCTGGT CCTGAAAATG AAAATTTGGG ATATTTACCT
GGAGAAATAT TGTATCAAAG AGAGTATGAA ATATACGATG AATATTTAGA TTTAAGGGTA
GAACCTGCTG TAAAAATAGT TTCAGTTAAG GGTATGCCCG TAGCCGATAT AGATGGAAAG
GTAGAAATAA AATCAGAACT AACACATACG GAAAGAGAAT TGAATTGGAT AATAATAAGA
GATGATACCG GCGTTGAAAG AAAGTATCCC GTTTTTGAAG GTTCATCAAT AATGGTAGAG
AATGGACAAG AGGTTGAAAA AGGAACACCT TTAGCAGATA GATTTTTGTT TGAAGAAGAT
TATCTAACCC AGAAGGAGTA CTCCTTATTC TTAGAATACT ATCCAGGTTC CATAGAAGTT
GAAAGAGATA TTGAGCGGGA TACACCGATT GTAGTTATCA CAGACATAGA TAAGAGATTT
GCAAAGAGAA TAGATAAAAA AATAGGAGAT ATTTTACTAG AAGATGAAGC AAGAGCCTAT
GAAGAAGTAA TGAAGGTACT AAACTCAAAG ATTAAGGAAG AAAGAGAAAA CGTAATTGAC
AAAGAATTAG TATCGGAAAT CGAATTTCCC GAAAAGAAAT TTGAAAAGGG AACAAAGATC
ACTCAAGAAG TGTTAAATGA ACTTCAAGAA TTTGGTGTAA AAGATTTAGT TGCAAAGGAA
GAAGATGGAA CTGAAAAGAT ATTTCAAATA AATAGATATG AAAAATTTGA GTATGGTTAC
GGTGCTGAAG CTATTCAAAA ATTGTTAACG AAGATCGATC TTGAAGTATT AAAAGCTCGA
TTAGAATCCG AATTAGAAAA ATTGGATAGA AAAAGTCAGA AGAGTGTAAA AATATTAAGA
AGACTGAAAC TAGTTAAGGA TTTTATCAAA TCTGGCAATC AACCTGAATG GCTAATTACA
AATATTATAC CCGTTATACC ACCCGATTTG AGACCTTTAA TACAAATTGA TGGAGGAAGG
TTTGCTGCTA CTGATTTAAA CGACTTATAT AGAAAAGTAA TAAATAGAAA CAACCGTTTA
AGAAAGTTAT TAGAAATGGA AGCACCGGAA ATTATCGTAA GAAACGAAAA AAGAATACTT
CAACAAGCTG TGGATTCACT TTTCTACAAT GGACGTGTTG GTAAACCAAT GACTGACAGA
AATAGAAGGC CATTAAGATC ACTCACAGAT TTGTTGAAAG GTAAAAAAGG TAGATTTAGA
AGGAACCTTT TAGGTAAAAG GGTTGATTAC TCCGGTAGAG CTGTAATCGC TGTTGGACCT
GATCTTAAGA TTCATGAATG TGGATTACCA AAAAAGATGG CTTTAGAACT ATTTAAACCT
TTCGTTCTTG CAGAGCTGTT AAGAGATTCA AACGTGGCAA GTAAAAGTGC CAGAAAATTC
AAAAAAACTA TAATAGAAAA GGAAATGCCT GAGGCTTGGG AAGTTTTGGA AGAGGTTATA
AAAGGGCATC CTGTTCTCCT AAACAGGGCA CCTACCCTAC ATAGGGTATC TATTCAAGCT
TTTATTCCAA AACTAATAGA AGGAAACGCC ATAAGGTTAC ATCCTTTGGT TTGTCCACCG
TTTAATGCTG ATTTTGACGG TGATCAAATG GCTATACATA TTCCCCTTTC CAATATAGCC
CAAGCAGAGT CAAAATTTTT AATGTTATCA AGATATAATA TTATCTCGCC TGCGAACGGC
AAACCATTGT CGATGCCAGG AAAAGATATA ATTGCTGGTG CGTATTATTT AACCATGCAT
GAAGATGAGA AGTTCAAAAA TCTAAAGGTG CCTACCAAAG TTTCTGAATT GGGAAAGAAT
GGGTATGTAA AACACATATT CTCCGAAGAT TTGGAAGCTA CATATGCTTA TGAATACCTA
AAAATAGTGG ATTCAGATAT ATATCTTCAA GATGGAAAAT TGATATGGAA AAAATCTGAT
TTACCCCTTC ATGAACCAGT TGCGTTTAGA TATAAAGATG GTAGTATCCT TAAAACGACT
ATCGGAAAAA TAATTTTTAA CGAAGAAGTA CCTGAGGATT TAAGAGACTA TACACAAAAA
ATGGATAAAA AGAATCTAAA AGAGCTGATA TTTAACACTT TTGAAAAACA TGGAATAGAT
AGAACCGCGG ATCTTTTAGA TAGTATTAAA GATTTTGGTT TCCATTATGC AACATTATCT
GGATTAACCA TATCTATACG TGATGTATTA GTTTCTCCTA AAAGGGAGGA ATTAATAGAA
GAATCTAAAG GAGAAGTTCT CAGAATCGAA TCGCTTTATG AAGAAGGTTA TTTGACGGAT
AATGAAAGAT ACAAAGAAAT AATTAAGATT TGGGAAAGCG CCACTGCCAA AGTTACAGAA
GAAACAGCGA AAACGTATAG AAAATACACT TTCAATCCAA TTTGGATGAT GATCGAATCT
GGTGCAAGGG GTAACATAGA TCAATTGAAA CAATTAGCAG GTATGAGAGG ATTGATGGCT
GATCCATCTG GAAAAATAAT TGAAGTTCCT ATCACTTCAA ACTTTAAAAA TGGGTTATCA
GAATTAGAAT TTTTTACCTC AACACACGGT TCAAGAAAGG GATCAGCTGA TACAGCTTTA
AGAACATCGA CAGCGGGTTA CTTAACTAGA AGACTCGTAG ATGTTGCTCA AAGCATAACT
ATCACAGAAG AAGATTGTGG AACAGATAAA GGTATTGAAG CAAGAGAGCT TTGGGCTGAC
GATTCAAAAA TTGAAAATCT TTCAGACTTC TTATTTGGTA GAGTTTTAGC TAAAGATGTT
TTGGATCCTG AAACAAAGGA AGTAATTTTT AATCCCCAAG CAGATAAAAA ATATGAAAGA
GGAATAATCT TAAAAGAGAA AGACGCCCAA TTCTTGGCAA ATTATGTAAA AGAAATTCCT
GTATCGAAGG AAAAAACGAT AAAAATTGAA GATATGCCAA AAGATTCCTA CTTAGAATCA
TTAGAAGATG TGCAAGTAGA AGGTAAGGTA TTAATCAAAA AAGGTGAAGA AATCACAGAA
GAAGCCATAG AAGAAGCATT CTTGCACGGC ATACAAAAAT TAGATGTTAA AGAATATACT
GCAGTAGACT ACGTTTACTC TGGAGAAGAT CTTAAAGTTG AAATTGATGG AAAAACAGTT
ACTTTGCTTA AATACCAAGA AAGAATAGAC TTAAAGGTTT CTAAAGTTCT CGAAAAACAT
GGCATAAAAA CGGTTACTGT TAGGCCATCT ATTTTCATAA GATCGCCTCT TACATGCGAG
TCTGAAAATG GTCTTTGTGC AAAGTGTTAT GGAATGGATC TTTCGAATTA CAAATTAGTC
AATAGAGGAG AAGCTGTAGG AATAATTGCT GCACAATCCA TAGGTGAACC AGGTACGCAG
TTAACTATGA GAACATTCCA TACTGGTGGT ATAGCCACTA CTTCGGATAT AACCCAAGGG
TTACCAAGAG CTGAAGAATT GTTTGAAGCA AGAAAAAAGA CAAAAGGACC TGAAGGTGAA
TTTTCGAAGA CAAAAGGCAT AGTAAGAGCC ATTGAAAGAG ATACTGAAAA CAAGAGAGGA
AGAAGATTAA AGATAATAAT CGAAAATTCA GATGGAGAAT TGGAAAGTTA TGAAGCTGAT
TATAGGACGA AAGCAGTTGT AGAAGAAGGA GATAAAGTAC TAGCGGGTCA AAGGTTAACA
ACCGGGAATA TAAAACCCAG AAATATACTC AAAGAATTGG GAGTAGGACC TTTGGCAAAT
TATTTGCTAA GTGAAATAAA GAAAATATAT GCTGAACAAG GTGTTGACAT ACATGATAAA
CACTTTGAAA TAATAATTAG ACAGATGATC AACAAAGTGG AAATTATAGA CGGTGGAGAT
ACCGACTTCA TGCCGGGAGA TTTAGTAAGT TATGGTAAGG TGCAGAAAAT CAACGAGGAA
ATATTGGAAG AAAACTCCTA TATAACAGAA AACAGAGAAT TAGTAGTTGG TAAAAAATTG
GCAAAGAGGG TTATAATTCC TGCCGAGGAT GAAGAAGAGG AAGAAGATAA GATCTTTGAA
CAAGGAACAG AGATAACTGA AGAAATTTTA AACCAAATTA TCGAAACAAA CATTAAAGAG
ATTGAAGTAT ATGAAGAATA TAAAGAGATT ACAACTGAAG AGGGTAAAAC TCATCTAGTA
GGCACATCCA AAAAATATCT TATAAATCCA AAAGATACGA TAAAATATGA ACGTAGGTTG
TTAAGAATCA CAAAGGCTTC TTTAGAAAGG GAAGGATGGC TTTCAGCTGC TTCATTCCAG
CAAACTGTAC AAATACTAAC AGAGGCAGCT ATAGAAGGTA AAGTAGATAG GTTGAAAGGA
TTAAAAGAAA ACGTGATAGT AGGACAACCT ATCCCAGCAG GAACAGGTTT GAAGTTGTAC
GCGGATCAAA ATTACGAAGT TGTTCAACCT GAAAAAGAAG CTGAAGCTGC ACAAGAAAAA
TCTGTCGGGT AA
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| Protein sequence | MANVSSFQRK IAKIKIGIAS PQSILEASNG EVKKPETLNH RTGKPEKDGL FCEKIFGPVK
DYECACGKYK GKKYEGTVCE RCGVKVESKE ARRRKIGHIE LATPISHIWY LKSSPSILSI
ILNIGVKDLE NIIYYGSKRV IERAYLTLPG PENENLGYLP GEILYQREYE IYDEYLDLRV
EPAVKIVSVK GMPVADIDGK VEIKSELTHT ERELNWIIIR DDTGVERKYP VFEGSSIMVE
NGQEVEKGTP LADRFLFEED YLTQKEYSLF LEYYPGSIEV ERDIERDTPI VVITDIDKRF
AKRIDKKIGD ILLEDEARAY EEVMKVLNSK IKEERENVID KELVSEIEFP EKKFEKGTKI
TQEVLNELQE FGVKDLVAKE EDGTEKIFQI NRYEKFEYGY GAEAIQKLLT KIDLEVLKAR
LESELEKLDR KSQKSVKILR RLKLVKDFIK SGNQPEWLIT NIIPVIPPDL RPLIQIDGGR
FAATDLNDLY RKVINRNNRL RKLLEMEAPE IIVRNEKRIL QQAVDSLFYN GRVGKPMTDR
NRRPLRSLTD LLKGKKGRFR RNLLGKRVDY SGRAVIAVGP DLKIHECGLP KKMALELFKP
FVLAELLRDS NVASKSARKF KKTIIEKEMP EAWEVLEEVI KGHPVLLNRA PTLHRVSIQA
FIPKLIEGNA IRLHPLVCPP FNADFDGDQM AIHIPLSNIA QAESKFLMLS RYNIISPANG
KPLSMPGKDI IAGAYYLTMH EDEKFKNLKV PTKVSELGKN GYVKHIFSED LEATYAYEYL
KIVDSDIYLQ DGKLIWKKSD LPLHEPVAFR YKDGSILKTT IGKIIFNEEV PEDLRDYTQK
MDKKNLKELI FNTFEKHGID RTADLLDSIK DFGFHYATLS GLTISIRDVL VSPKREELIE
ESKGEVLRIE SLYEEGYLTD NERYKEIIKI WESATAKVTE ETAKTYRKYT FNPIWMMIES
GARGNIDQLK QLAGMRGLMA DPSGKIIEVP ITSNFKNGLS ELEFFTSTHG SRKGSADTAL
RTSTAGYLTR RLVDVAQSIT ITEEDCGTDK GIEARELWAD DSKIENLSDF LFGRVLAKDV
LDPETKEVIF NPQADKKYER GIILKEKDAQ FLANYVKEIP VSKEKTIKIE DMPKDSYLES
LEDVQVEGKV LIKKGEEITE EAIEEAFLHG IQKLDVKEYT AVDYVYSGED LKVEIDGKTV
TLLKYQERID LKVSKVLEKH GIKTVTVRPS IFIRSPLTCE SENGLCAKCY GMDLSNYKLV
NRGEAVGIIA AQSIGEPGTQ LTMRTFHTGG IATTSDITQG LPRAEELFEA RKKTKGPEGE
FSKTKGIVRA IERDTENKRG RRLKIIIENS DGELESYEAD YRTKAVVEEG DKVLAGQRLT
TGNIKPRNIL KELGVGPLAN YLLSEIKKIY AEQGVDIHDK HFEIIIRQMI NKVEIIDGGD
TDFMPGDLVS YGKVQKINEE ILEENSYITE NRELVVGKKL AKRVIIPAED EEEEEDKIFE
QGTEITEEIL NQIIETNIKE IEVYEEYKEI TTEEGKTHLV GTSKKYLINP KDTIKYERRL
LRITKASLER EGWLSAASFQ QTVQILTEAA IEGKVDRLKG LKENVIVGQP IPAGTGLKLY
ADQNYEVVQP EKEAEAAQEK SVG
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