| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0247 |
|---|
| Symbol | |
|---|
| ID | 5757138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 262990 |
|---|
| End bp | 264279 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641301446 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_001567314 |
|---|
| Protein GI | 160901733 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0227591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAAAC TCAGTAGAAA TGGTAAGTTT AAATTTGTAA GCACTAAACA CAACAAGCAG
ATATTCGTTA CTCCGTTGAT AACAGATTCA CATTTACATA TATTGGGATT GGGAGAAAAG
TTATCTCAAC CAACTTTGGA GAAAAAGAAA CTATCTGAAA TTAAAAGCAT TATAGAAGAA
ATTGTCAGTA AAAGACCGTA TAAAATTGTT TTAAGAGGTT GGACCGAAGA ATTTGCAAAT
CCTAATAAAG ATTTTTTGGA TTCGATAAAC AGAGAAATCC CTATCATGCT GGTTAGAAGA
TGTGGACATT TTGCGGTTGT TAATTCAAAG GTTTTTGAGA GTATTGATTT TTCAGATTCA
AGTAATTACG TGGATTTTGA AGAAGGAAAA ATCAAAGAAA GTGCTATCGA TAAATTTTAT
AAAACCTTTG GTCCTTTCAC AGACGTGAAA AATAATTACG AAACCTCAAA GAAGTATCTA
AAAAATAAAG GTTATGGTTT TGTGCATTCA GATGATTTAC ATGGTATTTA TAAAGATAAC
TTGCCGTTTG TACATGATAA TGAGTTTTTT GTATATGAAA AAGTTGCTAT TAAGGATTAT
AATGAGCTTT CAAAATATTA TGAATCAGGA TACTTTGAAG AATTTAAATG TGTTAAAATA
TATTTGGATG GTTCCCTAGG AGCACGAACA GCTTTGTTGC TTAATAAGTA CAACGATTCT
GATACGTACG GGGAAAAATT ATGGGAAGAT GCTGAGCTAA CTTCCGTCGT TGAGTTTTGT
GAAGACAATG GACTTCATTT AGCTGCTCAT GCTATAGGAG ATGGGGCTAT AGAACAAATT
TTACGAGTTT TTGAAAAGGT CAATCCTAAA TTAAGGCATA GAATAATTCA TGCTATAGTG
CTTAGATCTA ATCAAATAGA AAGAATTAAA AAACATAATC TTATTGTAGA TATACAACCT
CAATTCATAG AATCCGATAA GGTTTTTATT GAAGATAGAT TGGGTGAAAG GGTAAAAGAT
GCCTTTAGAT TTTATGATTT ATACAGTTCA CAAGTGCCTC TTTTTATTTC ATCAGATGCC
CCAGTTGAAG AACCAGATTG GTTGAGAGAT ATTAAAAGGT TGAGAGAAAT AGGTATCCCT
TATAATTACT CTTTGTATCA GCTTACCTAT GGTCCAGAAA TTATAGACAA CGTTGATAGG
CAAGAAAGTA TGGAAAGTAA CGCTTTAATA TTTCAAAATG ATCCTTTTGT TGAAATATCT
CAACCAAAGA TCTATCAAAC TGAAAATTAG
|
|---|
| Protein sequence | MFKLSRNGKF KFVSTKHNKQ IFVTPLITDS HLHILGLGEK LSQPTLEKKK LSEIKSIIEE
IVSKRPYKIV LRGWTEEFAN PNKDFLDSIN REIPIMLVRR CGHFAVVNSK VFESIDFSDS
SNYVDFEEGK IKESAIDKFY KTFGPFTDVK NNYETSKKYL KNKGYGFVHS DDLHGIYKDN
LPFVHDNEFF VYEKVAIKDY NELSKYYESG YFEEFKCVKI YLDGSLGART ALLLNKYNDS
DTYGEKLWED AELTSVVEFC EDNGLHLAAH AIGDGAIEQI LRVFEKVNPK LRHRIIHAIV
LRSNQIERIK KHNLIVDIQP QFIESDKVFI EDRLGERVKD AFRFYDLYSS QVPLFISSDA
PVEEPDWLRD IKRLREIGIP YNYSLYQLTY GPEIIDNVDR QESMESNALI FQNDPFVEIS
QPKIYQTEN
|
|---|
| |