Gene Pmob_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0188 
Symbol 
ID5758449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp186782 
End bp187648 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content29% 
IMG OID641301387 
Productpolyprenyl synthetase 
Protein accessionYP_001567257 
Protein GI160901676 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.84444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC TAAAATTATT AGAGTTTAAA GATTTCTTTG ACAAGAAGAT AAAGAATTTT 
TTCGAAAATT TGGACCTGGA AGATTATTTA AAAGAGCCAC TGTTTTATTA CATAGAAAAT
GGAGGCAAAA GACTTAGACC CTGGATAATA TATAACTTCG GACAAATAAT CTCTATAAAT
AAAAAGAATT TAATTGACAT TGCGATAGCT GTCGAAATTT TACACTCATC ATCCTTGATA
CATGATGATC TACCTGCCTT AGACAATGCA AAGTTAAGAA GAGGAGCTCT AACAACTCAT
TTAAAGTTTG GAGAATATAA AGCCATACTA GCTGGAGATT ATGGATTCAC TCTCCCACTA
CAGATTGTTG CCGGTTTAGA TAATATTAAA GAAGGGAACA AACTTCTCTT AGTGGATTAT
TTTATAAAAA CCATTTTAAA ATTATTTCAA GGAGAAATGG AAGATCTAAT CTTCGAAAAA
GAAGATAAAA ATGTAGGTGA GAAAGAAATT CTTGAGATGT ATTCAAAGAA AACAGGGGCG
GTTTTTGGTT TTTGTTTTGC ATCTCCTTTT TTAATGGCTG GGGAAGCAGA GCTTGCTAAA
GAGATGAATA AAATAGGAAC TGATTTTGGT GTTTCTTTCC AAATTTTCGA TGATCTAAAA
GATATCTTTA CTAAAGAAGA AGATATTGGA AAAGAAACTA ATAAAGATGT AAACAAAAAA
ACTCTTTTAA ATTTTTATAA TTTTCAAGAA ACACAAATAA TAGCCGATAA TATTTATATA
AATGTTTTAC AAAAATTGGA AGACCTAAAT CTAAAAGAAC TATCTCAACT TTTGAAAGAA
GTTCGAAAGA TTATAGAAAC AAGGTAA
 
Protein sequence
MEFLKLLEFK DFFDKKIKNF FENLDLEDYL KEPLFYYIEN GGKRLRPWII YNFGQIISIN 
KKNLIDIAIA VEILHSSSLI HDDLPALDNA KLRRGALTTH LKFGEYKAIL AGDYGFTLPL
QIVAGLDNIK EGNKLLLVDY FIKTILKLFQ GEMEDLIFEK EDKNVGEKEI LEMYSKKTGA
VFGFCFASPF LMAGEAELAK EMNKIGTDFG VSFQIFDDLK DIFTKEEDIG KETNKDVNKK
TLLNFYNFQE TQIIADNIYI NVLQKLEDLN LKELSQLLKE VRKIIETR