Gene Daci_6031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6031 
Symbol 
ID5751662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6740815 
End bp6741234 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID641301173 
Productguanine-specific ribonuclease N1 and T1 
Protein accessionYP_001567044 
Protein GI160901462 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4290] Guanyl-specific ribonuclease Sa 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.791884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG CAGCCGCCGC CAAGGCGTAC CAGTCCGGTC TAGCGCTCAT CGTCGGGGCC 
GCCTTTGTGC TGTCGCCCTC GCTCGCTGAT GCGCGCCGCT CGGCGCCCGA GAGCGTGGAG
ACGACGGCGG CCATGGCCAC CGTCCCCCTG TCCGAGTTGC CGCGCGAAGG CCGTTCCACG
TATACGCTGA TCCTGCGCGG TGGGCCTTTT GCCCACGACA AGGACGGCAC GGTGTTCGGC
AACCGCGAGC GCATCCTGCC GCGCCAGTCG CGCGGCTATT ACCGTGAGTA CACGGTGCGC
ACGCCCGGTT CGCGTGACCG TGGAGCCCGC CGCATCGTCT GCGGCGGAGA GCCCCAGCAG
CCCGATGCCT GCTACTACAC CAGCGACCAC TACAGCAGCT TTCGCAAGAT CATCGAATGA
 
Protein sequence
MLKAAAAKAY QSGLALIVGA AFVLSPSLAD ARRSAPESVE TTAAMATVPL SELPREGRST 
YTLILRGGPF AHDKDGTVFG NRERILPRQS RGYYREYTVR TPGSRDRGAR RIVCGGEPQQ
PDACYYTSDH YSSFRKIIE