| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5980 |
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| Symbol | |
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| ID | 5751601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6670123 |
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| End bp | 6670860 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641301112 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001566993 |
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| Protein GI | 160901411 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.108646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACAGCC ATCCCCTCCT GACCGATTCC TCCTGTCTCC AATCGGGGCG CTATGCCCTG
GTGATCGACG ACCACCCGCT GACGGCCATG GGCGTGTCCG AGTTCCTGAA ACAATTCGGC
CTGTCCGAAG TCCATGCCGT GGCCGATGCG GGCGAAGGCC TGCAGTGCAT GGCCGGCAGG
GGATCGCCGC ATCTGGCCAT CGTGGATTTC TGGCTGGGTG CCAGTGCGGG CACGGACGTG
GTGCGCGAAA TCCGCACGCT GGCGCCCGCC TGCCGCGTGC TCATGACCAG CGGCGACACG
CATGGCGCGA TTGCCCTGAA GGCACGCGCG GCGGGGGCCC ATGGCTTTGT GCTCAAGTCG
CAGCCGCCGC AGGTGCTGCA GCAGGCCGTG GCGGCCCTGC TGCGCGGCGA GACCTGGTTC
CCCGCCGCCC CGCTGGCGCC GCAGTCACCG GGCGGCGCCC ATGCCATCCG CATGACGGCG
GCCGAGCTGG GCCTCACTCC GCGCCAGGCC CAGGTGCTGG ACCTGGTGCT GCGCGGCCTG
CCCAATCCCA GCATTGCGCA GTTGCTGCAC CTGTCGCCCC ACACGGTCAA GGAGCATGTG
GCGGGCGCCC TGCAGCGCCT GGGCGTGCAC AGCCGCATCG ACGCCATCAC GCGCATGCAG
GGCATTGCGC TGGAGCTGCC GCCCTCCGTA CCGCCGACCG ATACGGTTCA GGCGCCGGCC
ACGGCCAGCC TGCGCTGA
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| Protein sequence | MHSHPLLTDS SCLQSGRYAL VIDDHPLTAM GVSEFLKQFG LSEVHAVADA GEGLQCMAGR
GSPHLAIVDF WLGASAGTDV VREIRTLAPA CRVLMTSGDT HGAIALKARA AGAHGFVLKS
QPPQVLQQAV AALLRGETWF PAAPLAPQSP GGAHAIRMTA AELGLTPRQA QVLDLVLRGL
PNPSIAQLLH LSPHTVKEHV AGALQRLGVH SRIDAITRMQ GIALELPPSV PPTDTVQAPA
TASLR
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