| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5926 |
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| Symbol | prfC |
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| ID | 5751547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6596065 |
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| End bp | 6597762 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641301058 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001566939 |
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| Protein GI | 160901357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC GCGACAGACA TTACGTCTCC CTTTCCTGGC AGGCACCGCC CTGCCTTTGC
GCTTTCAATA CTGTGTCATA CGCCTCTGAA ACCCGGCGCC GCCGGACTTT TGCCATCATT
TCCCACCCCG ACGCGGGCAA GACCACGCTG ACCGAAAAGC TGCTGCTGTT CTCGGGCGCG
ATCCAGATCG CGGGCGCCGT CAAGGGCCGC AAGGCCAGCC GCCATGCCAC CTCCGACTGG
ATGGAAATCG AAAAGCAGCG CGGCATCTCG GTGGCCAGCT CGGTCATGCA GATGAGCTAC
CGCGATCACG TGGTCAACCT GCTCGACACG CCCGGCCACA AGGACTTCTC GGAAGACACC
TACCGCGTGC TCACGGCCGT GGACTCGGCG CTGATGGTCA TCGATGCCGC CAACGGCGTG
GAATCGCAGA CCCGCCGCCT GATCGAGGTC TGCCGCCAGC GCGACACGCC CATCATCACC
TTCGTCAACA AGATGGACCG CGAAGTGCGC GATCCGCTGG ACATCCTCGA CGAAGTCGAG
CGCGAACTGG GCATGCCCTG CTGCCCCGTC ACCTGGCCCG TGGGCCAGGG CCGGCAGTTC
GGCGGCATCA TCAACCTGCT CACCCAGACC ATGACGGTGT TCCAGCCCGG CAGCGAACGC
CGCCCGCAGG ACTTCGAGGC CATCCCCCTG GCCGAGGCCG ACAAGCTGCG CGCGCGCTTC
GGCCAGTCCT TCGACGATGC GCTGGAAAGC ATGGAACTGG CCCAGGGCGC CTCGGCCCCC
TGGGACCACG AGGCCTTCCT GGCAGGCAAG CTCACGCCGG TCTTCTTCGG CTCCGGCGTG
AACAACTTCG GTGTCATGGA AGTGCTGGAC GCCGTGGTCG ACATGTCGCC CCCGCCCGGC
CCCCGCAAAA GCTCGCTGCT GGTCAACAAG CAGCCTGTGG AAAAGATCAT CCAGCCCGAG
GACGAAGGCT TCTCCGGCGT GGTCTTCAAG GTCCAGGCCA ACATGGATGC CAACCACCGC
GACCGCATCG CCTTCGTGCG CGTGGCCTCG GGCAAGTACA CACCCGGCAT GAAGATGAAG
GTCCAGCGTA CTGCCAAGGA GCTGCGCCCC ACCTCCGTCG TGACCTTCAT GAGCCAGCGC
CGCGAGGCCG TGGAAGAAGC CTATGCGGGC GATATCATCG GCTTCACCAC GCACGGCGGC
GTCCAGCTGG GCGACACCAT CACCGACGGC ACCAACCTGC AATTCACAGG CCTGCCCTTC
TTCGCCCCGG AAATGTTCAT GACCGTGGTG CTCAAGAACC CGCTGCGCAC CAAGCAGCTG
CAGCAGGGCC TGATGCAGCT GGGCGAGGAA GGCGCCATCC AGGTCTTCAA GCCCGAGGCT
GGCGGCAACA TGCTGCTGGG CGCCGTGGGC CAGCTGCAAT TCGAAGTCGT CCAGCACCGC
CTGAACGCCG AATACGACTG CGACATCCGC CTGGAAGGCT GCCAGTACAC CGGCGCACGC
TGGATCACGG CCGACACCCC GGCCGAACTG CGCGAATTCG AGAACGCCTA CCCGCTGCGC
ATGGCGCGCG ATGCTGCCGA TACGCTGGCC TATCTGTGCA CCTCGCCGTA TGACGTGCGA
TTGGCGCAGG AGCGGTTTCC GAAGATTCAC TTTCATCCGC TGCGCGAGCA TGCGGGGTTG
GCGTTGCAAG TAGGGTAA
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| Protein sequence | MAARDRHYVS LSWQAPPCLC AFNTVSYASE TRRRRTFAII SHPDAGKTTL TEKLLLFSGA
IQIAGAVKGR KASRHATSDW MEIEKQRGIS VASSVMQMSY RDHVVNLLDT PGHKDFSEDT
YRVLTAVDSA LMVIDAANGV ESQTRRLIEV CRQRDTPIIT FVNKMDREVR DPLDILDEVE
RELGMPCCPV TWPVGQGRQF GGIINLLTQT MTVFQPGSER RPQDFEAIPL AEADKLRARF
GQSFDDALES MELAQGASAP WDHEAFLAGK LTPVFFGSGV NNFGVMEVLD AVVDMSPPPG
PRKSSLLVNK QPVEKIIQPE DEGFSGVVFK VQANMDANHR DRIAFVRVAS GKYTPGMKMK
VQRTAKELRP TSVVTFMSQR REAVEEAYAG DIIGFTTHGG VQLGDTITDG TNLQFTGLPF
FAPEMFMTVV LKNPLRTKQL QQGLMQLGEE GAIQVFKPEA GGNMLLGAVG QLQFEVVQHR
LNAEYDCDIR LEGCQYTGAR WITADTPAEL REFENAYPLR MARDAADTLA YLCTSPYDVR
LAQERFPKIH FHPLREHAGL ALQVG
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