Gene Daci_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5900 
Symbol 
ID5751521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6562219 
End bp6562734 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID641301032 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001566913 
Protein GI160901331 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA ATTCCATAGA ACTGGACGCC ACCGATCTGC GATTGCTGCA ATTGCTGCAG 
GTCGATGCCA GCCGCAGCAA CCAGGCCCTC GCCGCGCTGC TGCAGCTGTC GCCGCCCACC
TGCCTGCGCC GCGTGCGGCG GTTGCAGGAG ACCGGGCTGA TCGAGCGGCA GGTGGCCATC
CTCCAGCCGG AACGCCTGGC CGCCGCCCTG GGTCACGGGC TGCAGGCCAT CGTGGAAGTC
TCGCTGGACC GCCAGGACAG TGATTCGCTG GACAGCTTCG AGCGCCGCGC CGTGGCGCTG
GACGCCGTGC AGCAATGCTG GCGCGTGTCG GCCGGGCCTG ATTTCATCCT CGTGGTGGCC
GCGCCCGACA TGCCGGCCTA CCTGGAGTTA AGCCGCGCGC TATTCACGGG CGACGCCAAC
GTGCGCAATG TCAAGAGTTT TTTCAGCGTC AAGCGCGCCA AGTTTTCCAC CGCCATGCCG
CTGCCGTCCA CAAATCCCGG AACGGCCGCC GAATGA
 
Protein sequence
MTQNSIELDA TDLRLLQLLQ VDASRSNQAL AALLQLSPPT CLRRVRRLQE TGLIERQVAI 
LQPERLAAAL GHGLQAIVEV SLDRQDSDSL DSFERRAVAL DAVQQCWRVS AGPDFILVVA
APDMPAYLEL SRALFTGDAN VRNVKSFFSV KRAKFSTAMP LPSTNPGTAA E