| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5897 |
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| Symbol | |
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| ID | 5751518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6557155 |
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| End bp | 6559272 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641301029 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001566910 |
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| Protein GI | 160901328 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCT CCTTCCACAC CCTCCCCCCC ATTGCCGGCA TGCCCCGATC CTGCCTGTGC
CTTGCCCTGG CTGCCATCCC CGTGATGGCC TTCTCCCAGG CTGCCGACGC ACCGTCCACG
CAACTGGAAA CCGTGCAGAT CCAGGCCGAG AAGCAGCAGA ACAACGAAGA CAACTTCGTC
GCCCGCAAAA CCACGGGCGT GCTGCGCTCC GATGCGCCGC TGTTCGAGAC CGCGCAGTCC
ATCAGCGTGG TGACCCAGCG GCAGATCGAG GAAAAACAGG TCAGGTCCGT GGCCGAGGCG
CTGGAGAGCG TGGCCGGCGT GGCGTCCGGC TCGTACGGCC GGCGCGGCTG GGATGACTTC
ATCATCCGCG GCCAGATCTC CAGCGCGCAA ACCTATGTGG ACGGCCTGCG GGCGCAGACC
TCCACCAATG TGCTGCGCTC CGAGGACATC TTCGGCATCG GCTCCATCGA AGTGGTCAAG
GGCCCCACCT CGGTGGGCTT CGGCCTGGCC CTGCCGGGCG GCCTGGTCAA CCTGACCACC
AAGCGCCCGC AGGCCGAGTC GTTCTCGCGC GCCGGCATCA GCGTGGGCAG CTATGGATTG
AAGGAGGCCA ACTTCGACCT GAACTACTCG CCCGACGGAA GCCGCAAGGG CGCCTTTCGC
ATCGTGGGCC GCGCATCCGA CCAGAACGAT CCCACGGACT ACGTCTACTT CAAGAACCAG
TACCTGGCGG GCTCGTACAA CTTCGACCTG GATGGCAGCA ACGAGCTGTC CGTCATCGCC
AGCTACCAGC ACCGCAACTA CATCCGCAAC CAGGGCATTC CGCAGAACTA CGAAAAATAC
GGGCGCAATG TCTTCATCGG CGAACCCGAC CGCAGCTACG AGGTGGACTC CTACCGCCTG
GGCGCCAACT ACGCGCACTA CTTCGACAAC GAATGGGTGT TCCGCCAGAA CTTCGCGCTC
ACCAAGGGCA GCAGCCTGAG CAACTCGGTC TTTGCGGCGG CCAATGCCAG GTTCCCCCTG
GTCGCGCGCC AGATCAACTA CCAGGACAAG CAGGACGTCA ACATCGCCCT GGACAACTAC
CTGCAGCGCA ACTTCCGATT CGACCGCGTG AACTACGAGC TGACCGCCGG CATCGACATG
ATGCGAGAGC GCAGCGACTA CTACCAGCGC GTGGACAACA TCAACCCCTT CAACGCCGAC
AACCCGGTCT ATGGCGTCAC CTCCATCAAG GAGGGCAAGC CCTCGCACAA CCTGACCTAC
AGCCAGTACG TGGGCCTGTA CCTGCGCAAC ACCATCAAGA TCGATGAGAA ATGGATCGTC
GGCCTGAACG GCCGCCATGA CTGGACGCGC GTGGAAATCC AGGACAGGCT GGCCGGCGGC
TCCGTCAGCA ACAGCAACAC CGCCTTCACG GGCAGCGCCT CGCTGATGTA CCAGGCCAGC
GAGTTCCTGG CCCCCTACGT CAGCTACTCC ACCTCCTTCA TGCCCGTGAC GGATGCCGGC
ATCAACGGCA CGCTGCTCAA TCCCGAGGAA GGCAAGCAGA CCGAACTGGG CGTGAAATTC
CAGGCCCTGG ACCGGCGCGT GCAAGGCTAT CTGGCGGTGT ATGACCTGCG GCGCAAGAAC
GTCACCGAGA ACGACGCCAT GCTGGGCTAC GCCGTCCAGA CTGGCGAGCA GACCACCAAG
GGCTTCGAGG CGGAAGTCGC CGCCTCGCTG ACGCGGCAAT GGAATGTCTC GGCCGCCTAC
AGCTACATCC CCTCGGCCCG GACCTCCCAA AGCCTGACGG CCAGCGAAAT CGGCAAGCGC
ATCAACCATG TGCCCAAGAA CGCGGGCTCC GTCTTCACGC AGTACTACTT CAACCCCGAC
CGCCTGGGCT GGAACATGGG CGCAGGCCTG CGCATGCAGG GTGCCCGCAC GGCGCAGCGC
GGCACGGCCT TCGTCAACCT GGCCAGGTAC ACCCTGCTCG ACCTCAACGT GGGCTATGAA
GCGAAGTCAT GGGGCCTGAG CCTGGCCATC AAGAACCTGC TGGACAAGGA CTACGTCCAG
GGCACCACGC CGAACGCGCA GCTGCTGAGC TTCGGCAGCC CGCGCACGCT GATGGTGAGT
GCAAGGTTCA AGTACTGA
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| Protein sequence | MPSSFHTLPP IAGMPRSCLC LALAAIPVMA FSQAADAPST QLETVQIQAE KQQNNEDNFV
ARKTTGVLRS DAPLFETAQS ISVVTQRQIE EKQVRSVAEA LESVAGVASG SYGRRGWDDF
IIRGQISSAQ TYVDGLRAQT STNVLRSEDI FGIGSIEVVK GPTSVGFGLA LPGGLVNLTT
KRPQAESFSR AGISVGSYGL KEANFDLNYS PDGSRKGAFR IVGRASDQND PTDYVYFKNQ
YLAGSYNFDL DGSNELSVIA SYQHRNYIRN QGIPQNYEKY GRNVFIGEPD RSYEVDSYRL
GANYAHYFDN EWVFRQNFAL TKGSSLSNSV FAAANARFPL VARQINYQDK QDVNIALDNY
LQRNFRFDRV NYELTAGIDM MRERSDYYQR VDNINPFNAD NPVYGVTSIK EGKPSHNLTY
SQYVGLYLRN TIKIDEKWIV GLNGRHDWTR VEIQDRLAGG SVSNSNTAFT GSASLMYQAS
EFLAPYVSYS TSFMPVTDAG INGTLLNPEE GKQTELGVKF QALDRRVQGY LAVYDLRRKN
VTENDAMLGY AVQTGEQTTK GFEAEVAASL TRQWNVSAAY SYIPSARTSQ SLTASEIGKR
INHVPKNAGS VFTQYYFNPD RLGWNMGAGL RMQGARTAQR GTAFVNLARY TLLDLNVGYE
AKSWGLSLAI KNLLDKDYVQ GTTPNAQLLS FGSPRTLMVS ARFKY
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