| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5895 |
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| Symbol | |
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| ID | 5751516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6553702 |
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| End bp | 6556185 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641301027 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001566908 |
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| Protein GI | 160901326 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.358544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGC CCTTCACACC GACACCCGCC CGCGCGGCGC TGACCTGCCT GCTGGCTGCG
GCGGTGGCAT GGGCGGCCCC CGGCCATGCG GCCGAGCCCC TGGCGCAGAC CCGCCAGGCC
GCCAGGGCCT ATGAGATCGG GGCCGGCCCG CTGGCCTCGG TGCTGGGCCA GTTTGCGGCG
GCCGCAGGCG TGGCCCTGTC CTATGACCCG GCCAGCACGC GCCAGCGGCA GTCGGGTGGC
CTGCGCGGCA GCTATACCGT GGGCGCGGGC TTTGCGGCCA TCCTGGCGGG CTCCGGGCTG
GAGGCGGTGG AAGGCGGCGC GGGTGAATTC ATCGTGCGCA AGGCGGCCAT GCCCGCCACG
GCAGGCGCTG CAGCGGCCGA CGCCACCGAG CTGCCCGCCG TGCGCGTCGT GGCCCGGGCG
GCCCCTGCCC CGGTCGATGC CGACGAGCGC TACCAGCCCA CGCCCGATGC CTCCAGCCTG
CGCACCACGG CGCCCGTGCT GGAGATCCCG CAGGTGGTCA ACGTGGTGCC GGCCCAGGTG
ATCCGCGACC AGCGCCCGCG CAACCTGGAC GAGGCGCTGG CCAATGTCAG CGGCGTCACC
CAGGGCAACA CCCTGGCCAG CACGCAGGAC ACCATCATGA AGCGCGGCTT CGGCACCAAC
CGCGACGGCT CCGTCATGCA CAACGGCATG CCCCTGGTGC AGGGGCGCGG CATGAACGCC
GCCGCCGAGA GCGTGGAAGT GATCAAGGGC CCGTCCTCGC TGCTGTACGG CCTCATGGAC
CCGGGCGGCG TGATCAACGT GGTCAGCAAG AAGCCGCAGC TGCGCCAGCG CACGGCGCTG
TCGCTGCAGG GCTCGGGCTA CGCGGGCGGG CGCAACGGCA CGGGTGCCAC GCTGGACACC
ACCGGCCCCA TCGGTGAGAA CGGTCTGGCC TACCGCCTGG TCGTCGACCA TGTGGACGAG
GACTACTGGC GCAACTTCGG CCAGCACCGC GAGACGCTGG TGGCGCCGTC GCTGGCCTGG
TATGGCGACG ACACCCAGGC CGTGCTCTGG TACGAGTACC GCAAGTACCT GACGCCCTTC
GATCGCGGCA CGGCGCTGGA CCCGGTCACC CGGCGCCCGC TGGACCTTCC GGCCACGCGC
CGGCTGGACG AGCCCTTCAA CCAGATGACG GGCGAGACCC ACCTGGCCCA GCTCTCCGTG
GACCACCGCC TGGGCAGCGG CTGGGCCGCC CACCTGAACC TGAGCTACAA CCGCGAGATC
TACGACGCCA ACCAGCTGCG CGTGAACGGC GTGAACACCG CGCGCGGCAC CCTGCAGCGC
AGCAACGACG CCACGCACGG CGCACTCAGC ACCGACAGCT ATGGCTCGGC CTATGTGGAC
GGCAGCGTGC AGCTGGCCGG CCTGCGCCAT GACCTGCAGT TCGGCGCCGA TGCCGAGTCC
CGGCTGATCT ACCGCTCCGA CCTGCTGCGC CAGGCCGTCA CCTCCACCTT CAGCTACACC
AATCCCGTCT ACGGGCTGGA GCAGCCCTCG GCCACCGTCT CGGCCAGCGA CAGCGACCAG
AGGGACCAGC TGCACAACCA GTCGCTGTTC CTGCAGGACG CCATCCACCT GGGCGACCGC
TGGGTGCTGA CCACCGGCCT GCGCTACCAG ACCTGGCGCC AGACCGCCGG CCGGGGCCGC
CCGTTCAAGG CCAACACCCA GGCCGACGGC ACGGCCTGGC TGCCGCGCGC CGGCCTGGTC
TATCAACTGG CCAGCGGCCT GTCGCTCTAC GGCAACTACT CGCAATCGCT CAGGCCCACC
TCCACCATCG CGCCACTGGC CAGCGGCACC GTGATCGACT CGGGCGTGGC GCCCGAGGAG
GCCCGGTCCT GGGAAGCCGG CGCCAAGCTG GACCTGCCAG GGCAGCTCAC CGGCACGCTG
GCGCTGTTCG ACATCCGCAA GAAGAACGTG CTGGTGTCCC AGTTCAACGA CGCCACCAAG
CTGACCGACT GGCGCACCTC GGGCGCGGCG CGATCGCGCG GGCTGGAGGT GGATGTGGCC
GGCGAGCTGG GCCGCCACTG GAGCGCCATC GCGGCCTTTG CCTATGTGGA TGCCAAGACC
ACGCAGGACC CGCTCTACCA GGGCAACCAG CTGTGGAACG TGGCGCGGCA GACGGCCTCG
CTGTCGGCCG TGTACGACTT TGGCCAGGTG CTGGGCGGTG TGCTGGGCGG TGTGCTGGGC
GAGGGCCGGC TGCGCGTGGG CGGCGGCCTG CAGTACGTGG GCAAGCGGCC CGGCGACTCG
GCCAACGCCT TCTGGCTGCC GGGCTACACC GTGGCCCATG CCTTTGCCAC GTATGACACG
CGGATCAACG GCTACAGGAC GCGCTTTCAG CTCAACGTGA AGAACCTGTT CGACCGCACC
TACTACCCGT CGAGCGCCAA CACCTACTTC ATCTCGATGG GCGACGCGCG CCAGGTGCTG
CTGCGCGCCA CGGTCGAGTT CTGA
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| Protein sequence | MQTPFTPTPA RAALTCLLAA AVAWAAPGHA AEPLAQTRQA ARAYEIGAGP LASVLGQFAA
AAGVALSYDP ASTRQRQSGG LRGSYTVGAG FAAILAGSGL EAVEGGAGEF IVRKAAMPAT
AGAAAADATE LPAVRVVARA APAPVDADER YQPTPDASSL RTTAPVLEIP QVVNVVPAQV
IRDQRPRNLD EALANVSGVT QGNTLASTQD TIMKRGFGTN RDGSVMHNGM PLVQGRGMNA
AAESVEVIKG PSSLLYGLMD PGGVINVVSK KPQLRQRTAL SLQGSGYAGG RNGTGATLDT
TGPIGENGLA YRLVVDHVDE DYWRNFGQHR ETLVAPSLAW YGDDTQAVLW YEYRKYLTPF
DRGTALDPVT RRPLDLPATR RLDEPFNQMT GETHLAQLSV DHRLGSGWAA HLNLSYNREI
YDANQLRVNG VNTARGTLQR SNDATHGALS TDSYGSAYVD GSVQLAGLRH DLQFGADAES
RLIYRSDLLR QAVTSTFSYT NPVYGLEQPS ATVSASDSDQ RDQLHNQSLF LQDAIHLGDR
WVLTTGLRYQ TWRQTAGRGR PFKANTQADG TAWLPRAGLV YQLASGLSLY GNYSQSLRPT
STIAPLASGT VIDSGVAPEE ARSWEAGAKL DLPGQLTGTL ALFDIRKKNV LVSQFNDATK
LTDWRTSGAA RSRGLEVDVA GELGRHWSAI AAFAYVDAKT TQDPLYQGNQ LWNVARQTAS
LSAVYDFGQV LGGVLGGVLG EGRLRVGGGL QYVGKRPGDS ANAFWLPGYT VAHAFATYDT
RINGYRTRFQ LNVKNLFDRT YYPSSANTYF ISMGDARQVL LRATVEF
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