| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5828 |
|---|
| Symbol | |
|---|
| ID | 5751449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6484343 |
|---|
| End bp | 6485116 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300960 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001566841 |
|---|
| Protein GI | 160901259 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.243558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.949965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAG AACTGCCGCG CAGATACCTC AAGTACCACC AGACCGGGCG CCCCATGGCC
GCCATGGAGG CCAACTGGGC GCATGGCACC AGCACGGGCT GGCACTCCCA CCCGCGCGGC
CAGCTGCTGT ATGCGATCGA AGGCGTGATG TCCGTGCAGC TGCATTCCGG CTCCTGGCTG
GTGCCGCCCA ACCGGGGGCT GTGGATAGAG GCCGACGCCG AGCACGATGT GCGCATGTCG
GGCGACGTGA AGATGCGCAC GGCCTACATC GACGCCTCGG CCTTTGCGGA CCTGCCCGCG
CGCACCTGCG TGGTCAACGT GTCGCCCCTG CTGCGCGAGC TGGTGGTGGC CGCCGTCGGC
GTGCCGCTGG ACTATGCCGA AGGCAGCCGC GACGAGCGCC TGATGCACCT GCTGGTCGAT
GAGCTGCGCG CCGCCGAGGT GCTGCCCCTG CACCTGCCCC TGTCCACCGA TGCGCGGCTG
CGCCAGGTCT GCGAGGCCCT GATGCGCGAG CCTGCCGACA CCGCCACCGC CGAACACTGG
GCGCAGCGCC TGGGCGTGAG CGCCAAGACG CTGCAGCGCC TGTTCGTGAA GGAAACCGGC
ATGCCCTTCG CCCAGTGGCG CGAGCAGGCG CGGCTGATGT TCGCGCTGGG CCGCATTGCG
GCGGGCGAGC GCATCATCGA CATCGCCCTC GATTGCGGCT ATGCCAGCCA GAGCGCGTTC
ACGGCCATGT TCAAAAGGCA TTTCGGGGTG CCGCCTTCGG GCTTCCAGCG CTGA
|
|---|
| Protein sequence | MAAELPRRYL KYHQTGRPMA AMEANWAHGT STGWHSHPRG QLLYAIEGVM SVQLHSGSWL
VPPNRGLWIE ADAEHDVRMS GDVKMRTAYI DASAFADLPA RTCVVNVSPL LRELVVAAVG
VPLDYAEGSR DERLMHLLVD ELRAAEVLPL HLPLSTDARL RQVCEALMRE PADTATAEHW
AQRLGVSAKT LQRLFVKETG MPFAQWREQA RLMFALGRIA AGERIIDIAL DCGYASQSAF
TAMFKRHFGV PPSGFQR
|
|---|
| |