Gene Daci_5819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5819 
Symbol 
ID5751440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6475400 
End bp6476389 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID641300951 
Producthypothetical protein 
Protein accessionYP_001566832 
Protein GI160901250 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.659696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.528927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTC CCATGACCCA CTTCCAACGC TTCCTGTCCA TGGCTTTCCT GGCACTGGGC 
CTTGTGCTGG GCCTGGCGCC CTTGCCCGGC CATGCGGCCG AATTCCCGGA AAAGCCCGTG
CGCATCGTCG TGCCGTTCCC CGCCGGTGCC GCAGCCGATG CCGCCATGCG CGTGGTGGCC
CGCAAGATGT CCGAGCTGTG GCGCCAGCCC GTGGTCATCG ACAACCGCCC CGGCGTGCAT
GGCTTCCAGC TGGTGTCCTC CGCGCCGGCC GATGGCTACA CCCTGCTGCT GGGCGCGGGC
TCGGGCATGG TGACGGCGCC GCTGCTGTCC AGCAAGCTGT CCTACAACCC CTCGCGCGAC
TTCGTGCCCG TGGGGCGGGT GCTGATCAAC GTGCCCATCC TGACCACGCA CCCCAGCCTC
AATGTGAGCA CCGTGCAGGA GCTGGTGGCG CTGGCGCGCA AGAACCCCGG CGCGCTGAAC
TACAGCTCCA GCGGCAACGG CACGCCAGGC CATCTGTCCA TGGAAATGTT CCAGGCTGCC
ACGGGCACGC GCATGCTGCA GATTCCCTAC AAGGGCGGCG CGCCCGCCGT CAACGAACTG
GTGGGCGGCC ATGTGCAGCT GGGCATCAAT GCCGTGCCCA GCGTGGTGCT GCAGATCAAG
GCCGGCAAGC TCACGCCGCT GGCCGTGGCC AGCGCCACGC GCTCGCGCGC CCTGCCGCAG
GTGCCCACCA TGGCCGAGGC GGGCGTCAAG GACTTCGAAT ACGACATCTG GTATGCGCTG
TTCGCGCCCA CCGGCACGCC GCCTGCGGTG GTGGCCAAGG TCAATGCCGC GCTGGTGCGC
TCGCTGCAGG ACCGTGAAGT GGCCAAGTCT CTGGAGGCGC AGGGCGCCGA GCCCGCGCCC
ACCACGCCCC AGGAGCTGGC GCGCTTCATG CAGGAAGACA CGGCGCGCTG GGCCAAGCTG
GTCAAGGAAC GCAACCTCAA GCTCGACTGA
 
Protein sequence
MEIPMTHFQR FLSMAFLALG LVLGLAPLPG HAAEFPEKPV RIVVPFPAGA AADAAMRVVA 
RKMSELWRQP VVIDNRPGVH GFQLVSSAPA DGYTLLLGAG SGMVTAPLLS SKLSYNPSRD
FVPVGRVLIN VPILTTHPSL NVSTVQELVA LARKNPGALN YSSSGNGTPG HLSMEMFQAA
TGTRMLQIPY KGGAPAVNEL VGGHVQLGIN AVPSVVLQIK AGKLTPLAVA SATRSRALPQ
VPTMAEAGVK DFEYDIWYAL FAPTGTPPAV VAKVNAALVR SLQDREVAKS LEAQGAEPAP
TTPQELARFM QEDTARWAKL VKERNLKLD