| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5813 |
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| Symbol | |
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| ID | 5751434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6467743 |
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| End bp | 6470115 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300945 |
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| Product | helicase c2 |
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| Protein accession | YP_001566826 |
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| Protein GI | 160901244 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.208635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTACA CCGTGGCCGT GCGCGCGCTG TGCGAGTTCA CGGCGCGCGC GGGCGACCTG
GACCTGCGCT TCACACCCGC GCCCAGCGCG CTGGAGGGCA TGGCCGGCCA CAGCCTGGTG
CAGTCGCGCA GGGGCAAGGA CTACGAGACC GAGATCAGCC TGGCCGGTGA GTACGGCGAC
CTGCGCGTGC GCGGCCGTGC CGACGGCTTC GACGCCGGGG CTGGCCAGCT CGAGGAAATC
AAGACCTACC GCGGCCAGAT CGAGGGCGTG CGCGCCCATC ACCGCGCCCT GCACTGGGCC
CAGGCGCGCA TCTACGCCCA TCTGCTGTGC CAGGCGCGCG GCCTGCAGCG GCTGCGGGTG
GCCCTGGTGT ATTTCAACGT GGGCAACTCG GAGGAAACCG TGCTGGTGCA GGAGGAAGAC
GCGGCCACGC TGCGCGCCTT CTTCGAGCAG CAATGCGCGC TGTTCCTGGA CTGGGCACGC
AGCGAGGCCG CCCACCGCGC GGCGCGCGAG GCGGCGCTGG CCGCGCTGCG CTTTCCCATG
CAGGGCTTTC GCGCGGGCCA GCGCGAGCTG GCCGTGGCCG TCTACCGCGT GGCGCGCGCG
CAGCAGGGCG GCCAGTGCCT GATGGCGCAG GCGCCCACGG GCATCGGCAA GACGCTGGGC
ACCATCTTCC CCATGCTCAA GGCCATGCCG GACCAGGGCC TGGACCGCCT GTTCTTCCTG
ACGGCCAAGG GCACGGGCCA CGCTCTGGCA CTGCAGGCGC TGGCCAGCGT GAACCGGCAG
ATCGCCGAAC AGCACCAGCC ACCGCCGCAG GAACCGGCTG CGCCACAACC GCTGCCCTCG
CCACCCGCAC CGCCCACACC GTCCGCGCCA CCCGCAAGGC TGCGCGTGCT CGCCATCCTG
GCGCGCGACA AGGCCTGCGA GCATCCCGAC AAGGCCTGCC ACGGCGACTC CTGCCCGCTG
GCGCGCGGCT TCTTCGACCG GCTGCCCGCC GCGCGCGCCG CCGCGCTGCA GCAGGCGCCC
TGGGACCCGC CTGCCGTGCG TGCCGTCGCC CTGGCGCACG ACATCTGCCC CTACTACCTG
TCCCAGGAAC TGGTGCGCTG GAGCGACGTG GTCGTGGCCG ACTACCACTA CTTCTACGAC
AGCGCCGCCA TGCTGTACGC GCTCACCCAG GCCCAGCAAT GGAAGGTGGG CGTGCTGGTG
GACGAGGCCC ACAACCTGCT CGAGCGCGCG CGCCGCATGT ACACGGCCGA GCTGTCGCAG
TTTGCCCTGG CCGCCGCCCG CAAGGCGGCC ACCGGCGCGG TGCGCAAGGC GCTGGACCGT
CTCAGCCGCA GCTGGAGCGC GCTGAACAGG GAGCAGACCG CCAGCTACCA GGCCCATGAG
GAAGTGCCCG CAGGCCTGCT GGGCGCCGTG CAGCGCGCCG TGGCGGCCAT CGGCGATGCC
AATGCCGACA GCCCCATGCT GCCCGGCGAC CCCGTGCTGG ACTTCTACTG GGAGGCGCTG
CAGTTCATGG CGCTGGCCGA GCAGTTCGGC GGCCATGCGC TGTTCGATGT CCACCTGCTG
CCCGGGCGCT CAGGCCCCCG TCGCACGCCG GCATCCACGC TGTGCATACG CTGCGTGGTG
CCCGCGCCCC ACCTGGCGGC ACGCCATGCG GCGGCCCATG CCTCGGTGCT GTTCTCGGGC
ACGCTGAGCC CGCCGCACTT CTACCGCGAC ATCCTGGGTC TGCCCGAAGG CACGCACTGG
CTGGAGGCCG ACTCGCCCTT CCAGGCCGAC CAGCTCGATG TGCAGGTGGC CGGCCACATC
TCCACGCGCT ACCGGGACCG CGACCGTTCG CTGCGGCCCA TCGCCGACCT CGTGGCCGCG
CAGTACGCGC GCCGGCCGGG CAACTACCTG TGCTTTTTCA GCAGCTTCGA CTACCTGCAG
CGCGTGGCCG AATGCCTGCA GCGCGCCCAT CCCGATCTGC CGGTCTGGCT GCAGACCCCG
TCCATGGACG AGGAGGGCCG CGCGGCCTTC CTGGCCCGCT TCACCGAAGC CGGGCAGGGC
GTGGGCTTTG CCGTGCTGGG CGGGGCGTTC TCCGAGGGCG TGGACCTGCC CGGCGAGCGC
CTCATCGGCG CCTTCGTGGC CACGCTGGGC CTGCCCCAGG TCAATCCCGT GAATGAAGAG
ATGAAGCGCG CCATGGACCG CCAGTTCGGC GCGGACAAGG GCTATGACTA CAGCTATCTC
TACCCGGGCC TGCGCAAGGT GGTCCAGGCC GCAGGCCGCG TCATCCGCAG CGAGCGCGAC
CGCGGCGTGG TCTTTCTCAT CGACGACCGC TATCGGCGCG GCGAGGTGCA GGCGCTGCTG
CCGCGCTGGT GGCGGGTGGA GGGCATGCGA TGA
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| Protein sequence | MSYTVAVRAL CEFTARAGDL DLRFTPAPSA LEGMAGHSLV QSRRGKDYET EISLAGEYGD
LRVRGRADGF DAGAGQLEEI KTYRGQIEGV RAHHRALHWA QARIYAHLLC QARGLQRLRV
ALVYFNVGNS EETVLVQEED AATLRAFFEQ QCALFLDWAR SEAAHRAARE AALAALRFPM
QGFRAGQREL AVAVYRVARA QQGGQCLMAQ APTGIGKTLG TIFPMLKAMP DQGLDRLFFL
TAKGTGHALA LQALASVNRQ IAEQHQPPPQ EPAAPQPLPS PPAPPTPSAP PARLRVLAIL
ARDKACEHPD KACHGDSCPL ARGFFDRLPA ARAAALQQAP WDPPAVRAVA LAHDICPYYL
SQELVRWSDV VVADYHYFYD SAAMLYALTQ AQQWKVGVLV DEAHNLLERA RRMYTAELSQ
FALAAARKAA TGAVRKALDR LSRSWSALNR EQTASYQAHE EVPAGLLGAV QRAVAAIGDA
NADSPMLPGD PVLDFYWEAL QFMALAEQFG GHALFDVHLL PGRSGPRRTP ASTLCIRCVV
PAPHLAARHA AAHASVLFSG TLSPPHFYRD ILGLPEGTHW LEADSPFQAD QLDVQVAGHI
STRYRDRDRS LRPIADLVAA QYARRPGNYL CFFSSFDYLQ RVAECLQRAH PDLPVWLQTP
SMDEEGRAAF LARFTEAGQG VGFAVLGGAF SEGVDLPGER LIGAFVATLG LPQVNPVNEE
MKRAMDRQFG ADKGYDYSYL YPGLRKVVQA AGRVIRSERD RGVVFLIDDR YRRGEVQALL
PRWWRVEGMR
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