Gene Daci_5785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5785 
Symbol 
ID5751406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6439306 
End bp6440277 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content68% 
IMG OID641300917 
Producthypothetical protein 
Protein accessionYP_001566798 
Protein GI160901216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.150184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00326204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGACG AATCAGTGTT GATCGGGGTT TTGCAAAAAC GTGCCAAGAA GCTGGAGGAC 
AGGCGCCAGT TCTTCCGCAA GACCAGCGGC GTGGCCGTGG GCATGGCGGG CGGGGTGATC
CTGTCCGCCT GCGGCGGCGG CGGGGGCGAT GCGAATGCGC AGGCCAACGG GCCCACGGAT
GCGGAGATCC TGAACTTCGC CCTCAACCTG GAGTATCTGG AGTCGCAGTT CTATCACTAC
GCGGTGTTCG GCACCGGCCT GCCCGCCAAC CTGCAGTCGG GCGTGGGCAC GCAGGGCGCC
ATCACGGGCG GCCGTGCCGT GGCCTTCAAG GACCCCGTGG TGGCGCAGTA CGCCAAGGAG
ATCGCCCAGG ACGAGATCGC CCACGTGGCA TTCCTGCGAG CGGCGCTGGG CTCGGCCGCG
GTGGCGCAGC CGCAGATCGA CATCGGCGGA ACCGACCCGA ACGGCGCCTT CTCGGTGGCG
GCGCGAGCGG CCGGGCTGGT GGGCGCGGGC ACGGCCTTCG ATCCCTATGC GAGTGACGAG
AACTTCCTGC TGGGGGCCTT CATCTTCGAG GACGTGGGCG TCACCGCCTA CAAGGGCGCA
TCGCCGCTGA TCACCAACAA GACCTATCTG GAGGCAGCCG CCGGCATCCT GGCCGCCGAG
GCCTACCACG CAGGTCTGGT GCGCACGGTG CTGTACGCCA AGGGCCTGGC CACGCCCGCG
CTGCGCACGG CGGCCGGCGC CATCTCGGAT GCGCGCGACA GCCTGGATGG CTCCACCGAC
GTGGACCAGG GCATCACGGG GGACGCCACC ACGTCCAACA TCGTGCCGCT GGATTCCAAC
GGCATCGCTT TCAGCCGCTC GCCGGGCGAC GTGCTGAACA TCGTGTACCT GACCAAGGAC
ACGGCGACCA AGGGCGGGTT CTTCCCGGCC GGCGTGAATG GCTCGCTGGT GATGAGCAGC
GCCTACGCCT GA
 
Protein sequence
MSDESVLIGV LQKRAKKLED RRQFFRKTSG VAVGMAGGVI LSACGGGGGD ANAQANGPTD 
AEILNFALNL EYLESQFYHY AVFGTGLPAN LQSGVGTQGA ITGGRAVAFK DPVVAQYAKE
IAQDEIAHVA FLRAALGSAA VAQPQIDIGG TDPNGAFSVA ARAAGLVGAG TAFDPYASDE
NFLLGAFIFE DVGVTAYKGA SPLITNKTYL EAAAGILAAE AYHAGLVRTV LYAKGLATPA
LRTAAGAISD ARDSLDGSTD VDQGITGDAT TSNIVPLDSN GIAFSRSPGD VLNIVYLTKD
TATKGGFFPA GVNGSLVMSS AYA