Gene Daci_5773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5773 
Symbol 
ID5751394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6427206 
End bp6427877 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID641300905 
Producthypothetical protein 
Protein accessionYP_001566786 
Protein GI160901204 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000274794 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAG AAACAACGAC TGAAACCCCG GCCGGCACAG GCGCAGATAC AGGCACCCAT 
ACAGACGCCG CCGCCCGGCG CCGCCAGGCC GTGGACGCTG CCCTGGCCGA CGTGCGCCAG
CTGCTGCAGG CCGGCGCGCC CGACCGCAGC ACCCTGTCGG CCATCACCGC ACGCCTGGAG
CAGCTGGCCG CGCACAAGGC CTTGTTCAGC CGCTCGGACT TCCCCCCGCC CGCGCAGACC
GAGGGCGTGG GTGCCTCCAC GCGCTACCGC CTCAACCCGG TCGATGGCGA TGCGGGCCTG
GCCCTTTACC TGAACTCCAT CAACCCCGGC AAGACCACGG CCCCGCACAA CCACACGACC
TGGGCCGTGA TCGTTGCCGT CGAAGGCCAG GAGCTCAACC GACTCTACGA GCGCACGGAC
GACCGCAGCG ACCCCGCACG CGCCAGCATC CACCTGGCGC GCGAATTCAC CGTGCAGCCG
GGCGCCTCCA TCGCCTTCCT GCCCGATGAC ATCCACAGCA TTGCCGTCGT GGGCGAGCAG
CCCACGCTGC ACTTCCATCT CTACGGCCAG CCGCTGGAAA CCCTGAGCGG CCGCGTGGCC
ATCGACCCCG ACACCGGCGA AGTCAAGAAC TACAACGCCG CCTACTTCCG TCCCAGCGAG
GCCGTGGCAT GA
 
Protein sequence
MTAETTTETP AGTGADTGTH TDAAARRRQA VDAALADVRQ LLQAGAPDRS TLSAITARLE 
QLAAHKALFS RSDFPPPAQT EGVGASTRYR LNPVDGDAGL ALYLNSINPG KTTAPHNHTT
WAVIVAVEGQ ELNRLYERTD DRSDPARASI HLAREFTVQP GASIAFLPDD IHSIAVVGEQ
PTLHFHLYGQ PLETLSGRVA IDPDTGEVKN YNAAYFRPSE AVA