| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5763 |
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| Symbol | |
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| ID | 5751384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6417267 |
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| End bp | 6418457 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641300895 |
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| Product | fimbrial protein |
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| Protein accession | YP_001566776 |
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| Protein GI | 160901194 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000000317961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTCAT TTCCAGCCCC TCATTATTCA CTCAAAAGTT CAATAAAACT ATTGCGTGAT
ATTTTCGAGA ATCATACTTC AGCAATGGAC CGAATCAGTA TCATGCATTT CTCTTGCATC
CCCTCATTTG TCTTGCGAGT ACGCCGCCTT GCATTGATCG CCCTTCCATT TCTCATCGCT
TTTTCAGCGG CAACGATGAA CACCAATGCC TTTGCCGGGG GCGTATTCTC CCCCACCAGT
TCCAGCATTT CACTGCCCGA GGAAATAACA GTACCCGGAA ATTACGCCAA CGGATCGACG
CTATGGAAGT CTACGGCAAC CGTATTTAAT CTTAAAGCAG TGCTGAACAC GGCATTCGAG
TACGATGTTT CCAAAGCCGT TGTATTCGCC AATGTTCAAT CCGGGACCAA GACGCCCGGA
TACAATAATG TCTACGGCAC CAATATTCCC GGCATTGGAA TCCGCTGGTG GGCAACATGG
CGAGGCCCCA GCGCTCCCAA TGGCAGAACC ATGCCCATTA CCACCGAATC AGAAAATCAT
TCGGGCGCGC TGGGCTATTT CTGGAATAGC TCATACCCCC AGGATGTCTG GTTCGAGCTG
GTGAAAACCG GCAGCGTTTC CGCTGGCACC CTAACGGGCT CCGGGATGAA CGTCGAGATG
CGATTCCAGT GCCCCGGCTG CATCGCAGGA AACGTCAACC TGTCCGGCCG CACCAGGGTG
GTGGTCGGTC CCTCCTGCTC GGTGGCCGCC TCGACCATCT CCGTACCCAT GGGCGCTGTG
CCCATCCTGC GATTCACGGG CCTCCAATCC ACCTCCATCC CCCAGCACTT CGACATCACG
CTGGAATGCA AGGGCGGCGC GCCCGAAAGC GTTCTGCGTC CCCACATCAC GCTCACCGAT
GCCAACGACA CCAGCAATCA GAGCACCGTC CTGACCTTGA GCCAGGCCAC GTCAGGCGGC
AAGCCGGTTG CCACCGGAAT AGGCATACAG ATACTGAAGG ATGGCACCGC TCTCGGCTAC
GGCCCGGACT CCAACGTGCC TGGCAACACC AACCAATGGA GTGCGGGAAC CATCGCCCAG
GGCGTTGCCC AGTTCAAGAT CCCGCTGACT GCCAAATACG TGCAGACCGC TGCGGCAGTC
ACGACGGGGC AGGCCAATGG CAGGGCCACC TTCACGCTGA ACTACCAGTG A
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| Protein sequence | MLSFPAPHYS LKSSIKLLRD IFENHTSAMD RISIMHFSCI PSFVLRVRRL ALIALPFLIA
FSAATMNTNA FAGGVFSPTS SSISLPEEIT VPGNYANGST LWKSTATVFN LKAVLNTAFE
YDVSKAVVFA NVQSGTKTPG YNNVYGTNIP GIGIRWWATW RGPSAPNGRT MPITTESENH
SGALGYFWNS SYPQDVWFEL VKTGSVSAGT LTGSGMNVEM RFQCPGCIAG NVNLSGRTRV
VVGPSCSVAA STISVPMGAV PILRFTGLQS TSIPQHFDIT LECKGGAPES VLRPHITLTD
ANDTSNQSTV LTLSQATSGG KPVATGIGIQ ILKDGTALGY GPDSNVPGNT NQWSAGTIAQ
GVAQFKIPLT AKYVQTAAAV TTGQANGRAT FTLNYQ
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