Gene Daci_5705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5705 
Symbol 
ID5751325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6341447 
End bp6341911 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID641300837 
Productcalcium-binding EF-hand-containing protein 
Protein accessionYP_001566718 
Protein GI160901136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0268873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0299262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT CTGCCCTGCT GCGCCGGCCA CCGCTGCTGC AGGCCGCCGT CGTCGTGCTG 
CTGACCAGCG CCTTCATGCT GCCCGCAGCG CGCGCGCAGG CGGCAGAAAA CGCAGCCACC
GAGCAGGCAA CGGCCAGCCC GGCGCCGCTG ACCAAGGGGG AGATCAAGGC CCAGCGCGAG
TTCAAGATGC TGGACTTCAA CAAGGACGGC AAGCTCAGCC GTGCCGAAGT GGCGCTGTTC
CCGCGCCTGT CGGCGGCCTT CGACGAGGCC GACACCGACA AGGACGGCTA CGTCTCCTAT
GCGGAGGTGC AGGCCTTTGC CGTCAAGTAC CGCGCCGAAC GCGACAAGGC AAAGGCCAAG
GCGCAGGCCG AAGAGGCAAA GGCCGCCGAG CGTGCGGCAG CCGAGCATGC TGCAGCCGCA
CCCGCTGCCA GGGACAAGAA GGAAGGCGAA GGCTCAAAGG ACTGA
 
Protein sequence
MNRSALLRRP PLLQAAVVVL LTSAFMLPAA RAQAAENAAT EQATASPAPL TKGEIKAQRE 
FKMLDFNKDG KLSRAEVALF PRLSAAFDEA DTDKDGYVSY AEVQAFAVKY RAERDKAKAK
AQAEEAKAAE RAAAEHAAAA PAARDKKEGE GSKD