| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5694 |
|---|
| Symbol | |
|---|
| ID | 5751314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6329801 |
|---|
| End bp | 6331093 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641300826 |
|---|
| Product | general secretion pathway L |
|---|
| Protein accession | YP_001566707 |
|---|
| Protein GI | 160901125 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3297] Type II secretory pathway, component PulL |
|---|
| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.117441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG GCTGTCACAC TCGCCCCCTA CAATGCCCGC TTCCGCCCAT GAGCACCTTG
ATTCTTCATC TGCCTGCGGG CCCCGCTGGC GAATACGCCT ACGCACTCAG CAGTGACGGC
CTGCGCGCCG ACCGGCATGG CCACGCCGCC GCAGGCCTGC TGCCCGATCC TGGCCGCACC
GGCCAGACGG TTGCCGTGGT GCCGCACCAG GCCTTGTCCT GGCATCTGGT CAGCCTCCCC
CATGGCGTGC CTACGGGTAG CCGGCGCGGA CATGTGCGCC TGCGCGCCGT GCTCGACGGG
CTGCTGGAAG AGCGCCTGCT CGACGAGCCC TCCCAATTGC ACCTGGCCCT GCAGCCGCAG
GCACGCGCAG GCGAGCCCTG CTGGGTTGCC GCCTGCAACA AGGCTTGGCT CCATGCCCAC
CTGCAGGCCC TGGAATCCGC AGGGCGGCCC GTGGGCCGCA TCGTGCCGGA ATGTCCGCCC
CAGGCCACGC CCCAGCTCTG GGCCGTGGGC TCACCCGAAT CGGCCTGGCT GCTGGCCACC
GGCCTGAGCA CCGCCGCGCA GGGCATGGAC TCGCTGGCCT GCCTGCCGCT GCGCACCGAC
AGTGCCGACC CGGCCATGCT GGCCGCCCTG CTTCAGGCCC TGCCCCCCGA CACCCCGATC
CAGGCCGACC CGGCGCTGGC CCGCGCCGCC GAGGCCCTGC AGCGCCCCGT CAGCCTGCTG
ACGGACGCCC AGCGCGGCCT GGCGGCCCGC GCACAAAGCT GGGATCTGGC CCAGTTCGAC
CTGGATCTGG GCGGCGGCAG CCGCACACGG CGGCGCATGC TCGACGGCTG GCAAAGCTTT
TTGCGCGCGC CGCAATGGAA GGCCGCGCGC TGGGGCGCCG TGCTCGCCCT GCTGGCCCAG
GTAGTGGGCA TCAATGCCTG GGCCTGGACC GAGAACCGCG CCATTGCGGC CAAGCAGGTC
CAGGTGCGCT CCACGCTGGC CACCAGCTTT CCCCGCGTGC CCGTCATCGT CGACGCGCCC
GTTCAAATGC AGCGCGAAGT CGCCACGCTG CGCCAGACCG CCGGCGCGCT GACTCAGGGC
GACCTGGAGC CCCTGCTGGC CGCCGCATCC CGGGCCCTGC CCGCTGGACA GTTGCCCCAG
GCCATGGACT ATCAGGACCG GCAGCTGCGC CTCAAGGGCG TCTCGCTGGA GGCCGAGGCA
CTGGAGCAGG CACAACAACA CCTGGCCGGC AGCGGCCTGC GACTGCAGCG CGACGGCGCC
GACCTGCTGC TTGCCCAGGA GGCCCGGCCA TGA
|
|---|
| Protein sequence | MTDGCHTRPL QCPLPPMSTL ILHLPAGPAG EYAYALSSDG LRADRHGHAA AGLLPDPGRT
GQTVAVVPHQ ALSWHLVSLP HGVPTGSRRG HVRLRAVLDG LLEERLLDEP SQLHLALQPQ
ARAGEPCWVA ACNKAWLHAH LQALESAGRP VGRIVPECPP QATPQLWAVG SPESAWLLAT
GLSTAAQGMD SLACLPLRTD SADPAMLAAL LQALPPDTPI QADPALARAA EALQRPVSLL
TDAQRGLAAR AQSWDLAQFD LDLGGGSRTR RRMLDGWQSF LRAPQWKAAR WGAVLALLAQ
VVGINAWAWT ENRAIAAKQV QVRSTLATSF PRVPVIVDAP VQMQREVATL RQTAGALTQG
DLEPLLAAAS RALPAGQLPQ AMDYQDRQLR LKGVSLEAEA LEQAQQHLAG SGLRLQRDGA
DLLLAQEARP
|
|---|
| |