Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5694 |
Symbol | |
ID | 5751314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6329801 |
End bp | 6331093 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641300826 |
Product | general secretion pathway L |
Protein accession | YP_001566707 |
Protein GI | 160901125 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.117441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGATG GCTGTCACAC TCGCCCCCTA CAATGCCCGC TTCCGCCCAT GAGCACCTTG ATTCTTCATC TGCCTGCGGG CCCCGCTGGC GAATACGCCT ACGCACTCAG CAGTGACGGC CTGCGCGCCG ACCGGCATGG CCACGCCGCC GCAGGCCTGC TGCCCGATCC TGGCCGCACC GGCCAGACGG TTGCCGTGGT GCCGCACCAG GCCTTGTCCT GGCATCTGGT CAGCCTCCCC CATGGCGTGC CTACGGGTAG CCGGCGCGGA CATGTGCGCC TGCGCGCCGT GCTCGACGGG CTGCTGGAAG AGCGCCTGCT CGACGAGCCC TCCCAATTGC ACCTGGCCCT GCAGCCGCAG GCACGCGCAG GCGAGCCCTG CTGGGTTGCC GCCTGCAACA AGGCTTGGCT CCATGCCCAC CTGCAGGCCC TGGAATCCGC AGGGCGGCCC GTGGGCCGCA TCGTGCCGGA ATGTCCGCCC CAGGCCACGC CCCAGCTCTG GGCCGTGGGC TCACCCGAAT CGGCCTGGCT GCTGGCCACC GGCCTGAGCA CCGCCGCGCA GGGCATGGAC TCGCTGGCCT GCCTGCCGCT GCGCACCGAC AGTGCCGACC CGGCCATGCT GGCCGCCCTG CTTCAGGCCC TGCCCCCCGA CACCCCGATC CAGGCCGACC CGGCGCTGGC CCGCGCCGCC GAGGCCCTGC AGCGCCCCGT CAGCCTGCTG ACGGACGCCC AGCGCGGCCT GGCGGCCCGC GCACAAAGCT GGGATCTGGC CCAGTTCGAC CTGGATCTGG GCGGCGGCAG CCGCACACGG CGGCGCATGC TCGACGGCTG GCAAAGCTTT TTGCGCGCGC CGCAATGGAA GGCCGCGCGC TGGGGCGCCG TGCTCGCCCT GCTGGCCCAG GTAGTGGGCA TCAATGCCTG GGCCTGGACC GAGAACCGCG CCATTGCGGC CAAGCAGGTC CAGGTGCGCT CCACGCTGGC CACCAGCTTT CCCCGCGTGC CCGTCATCGT CGACGCGCCC GTTCAAATGC AGCGCGAAGT CGCCACGCTG CGCCAGACCG CCGGCGCGCT GACTCAGGGC GACCTGGAGC CCCTGCTGGC CGCCGCATCC CGGGCCCTGC CCGCTGGACA GTTGCCCCAG GCCATGGACT ATCAGGACCG GCAGCTGCGC CTCAAGGGCG TCTCGCTGGA GGCCGAGGCA CTGGAGCAGG CACAACAACA CCTGGCCGGC AGCGGCCTGC GACTGCAGCG CGACGGCGCC GACCTGCTGC TTGCCCAGGA GGCCCGGCCA TGA
|
Protein sequence | MTDGCHTRPL QCPLPPMSTL ILHLPAGPAG EYAYALSSDG LRADRHGHAA AGLLPDPGRT GQTVAVVPHQ ALSWHLVSLP HGVPTGSRRG HVRLRAVLDG LLEERLLDEP SQLHLALQPQ ARAGEPCWVA ACNKAWLHAH LQALESAGRP VGRIVPECPP QATPQLWAVG SPESAWLLAT GLSTAAQGMD SLACLPLRTD SADPAMLAAL LQALPPDTPI QADPALARAA EALQRPVSLL TDAQRGLAAR AQSWDLAQFD LDLGGGSRTR RRMLDGWQSF LRAPQWKAAR WGAVLALLAQ VVGINAWAWT ENRAIAAKQV QVRSTLATSF PRVPVIVDAP VQMQREVATL RQTAGALTQG DLEPLLAAAS RALPAGQLPQ AMDYQDRQLR LKGVSLEAEA LEQAQQHLAG SGLRLQRDGA DLLLAQEARP
|
| |