| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5692 |
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| Symbol | |
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| ID | 5751312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6328129 |
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| End bp | 6328830 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300824 |
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| Product | hypothetical protein |
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| Protein accession | YP_001566705 |
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| Protein GI | 160901123 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.434625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.174572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGCCACC CCTCCCGCAC GCACGGCTTC ACCCTGGTGG AGCTGATGGT GGCCATCGCC
GTCATGGCCC TGCTGGCCCT GGTGAGCTGG CGCGGACTGG ACAGCATGGT GCGCTCGCAG
GAGAGCATTC GTGCCCGCAA CGAGCAGCAG ATGGTGCTGC AGACCGTCAT CGCCCAATGG
AATGCCGACC TCGAAGCGCT GATGCCGCTT GAAAACACGC AGGTCATCGA CTGGGACGGC
CAGGTGCTGC GCATGACCCG CAAGAGCAGC GCCGCCGTGG ACGACGGCGC CGTGGTCGTC
GCCTGGGCGC GCCGCCAGAC GGCAGGGCGC GACCAGTGGC TGCGCTGGCA GTCGCCGCCG
CTGCGCACGC GCGCACAGTG GCGCGATGCC TGGAACCAGG GATCGCAATG GGGGCGCAAC
CCCTCGGACG ACCAGCGCCG GCGCGAAACC GTGCTGATGC CCCTGGACCA ATGGCGCCTG
TACTACTACC GCGACAACGC CTGGAGCAAT CCGCAGTCCA GCGGCTCGGA CAACGGCACG
GGCACGGTCA ACCCGCCGTC CGGCGGCACC AACAGCAGCG CGCAGCTGCC CACGATTCCC
GACGGCATCC GCGTCGAACT GACCCTGCCG CCCGACAGCG CCATTCCTGG CCGCGTCACC
ATGGACTGGG TCAACCCCTT GCGCTCCAAC AGCCGATCAT GA
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| Protein sequence | MRHPSRTHGF TLVELMVAIA VMALLALVSW RGLDSMVRSQ ESIRARNEQQ MVLQTVIAQW
NADLEALMPL ENTQVIDWDG QVLRMTRKSS AAVDDGAVVV AWARRQTAGR DQWLRWQSPP
LRTRAQWRDA WNQGSQWGRN PSDDQRRRET VLMPLDQWRL YYYRDNAWSN PQSSGSDNGT
GTVNPPSGGT NSSAQLPTIP DGIRVELTLP PDSAIPGRVT MDWVNPLRSN SRS
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