Gene Daci_5674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5674 
Symbolpgi 
ID5751294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6311779 
End bp6313401 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content68% 
IMG OID641300806 
Productglucose-6-phosphate isomerase 
Protein accessionYP_001566687 
Protein GI160901105 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.26291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT TGCCCGTTCT GTGCAATACC TTGCCGGCAT GGCCGGCACT TGAAAGCCAT 
TTCCACGAAG ACATCCAGAC CCTGGATCTG CGCCAGGCCT TTGCCGCGGA CGCGGGCCGG
CTGGACGCGC TGAGCCAGCA GGCGCCCCAT GTCTTTGCCG ACCTGTCCAA GAACCTCTGG
ACCGAGCGCA CCGAAGAGCT GCTGCGCGAG CTGGCGCAGC AGACCGGCGT GCTGGCCCAG
CGCGACGCCA TGCTGGCCGG CGAGCCCGTC AACTGTACCG AAGGCCGTGC CGTCATGCAC
TGGCTGCTGC GCATGCCGCG CGACGGCGGC CAGCTGCGCC ACTGCGCCAC CGTGCAGCAG
TGGCAGCCGG CCATGCACGA GGCGCTGGGC CAGGTGCACG AGACGCTGGA CGCCATGCTG
GCCCTGGCCG AGCAGGTGCG TGGCGACGAG GGCATCACCG ACATCGTGAA CATCGGCATC
GGAGGCTCGC ACCTGGGCCC CGAAGTGGTG GTCAATGCGC TGGAGGACTG GGTCGATGCG
GGCAAGAATT TCCATTTCGT CTCCAACGTC GATGGCCATG AGCTCGGCCA TGTGCTGCGC
CGCGTGCGCC CGCACAGCAC GCTGTTCCTG ATCGCCTCCA AATCCTTCAC AACGGCCGAG
ACCATGCTCA ACGCGCACTC GGCGCGCCGG TGGTTCCTGG AGCAGGGCGG CAGCGAGGAT
CCGCAGGCCG CATGCTCCAT CGACCGGCAC TTCGTGGCGC TCACCACCAA TGTGCAGGCC
GCAGCCGACT TCGGCATCCG CCGCACGCTG GGTTTCTGGG ACTGGGTGGG CGGCCGTTTT
TCGCTGTGGT CGGCCATCGG CCTGCCGGTG GCCATTGCCA TCGGCGCGGC GCAGTTTCGC
GCGCTGCTGG ATGGCGCCCA TGCCATGGAT GCGCATTTCT TTTCCTCCGG CGTGGAGGGC
AACCTGCCGC TGCGCCTGGG CCTGCTGGAT GTCTGGTACC GCGATTTCTG CGGCTTCTCC
AGCCGCTGCA TTGCCCCCTA CAGCCATGGC CTGCGGCGGC TGACCGCCTA CCTGCAGCAG
CTGGAGATGG AGAGCAACGG CAAGGGCGTG ACGCGCGACG GGCAGACACT GCCCGTGCGC
ACGGCGCCCG TGATCTGGGG CGAGCCCGGC ACCAATGGCC AGCATGCCTT CTTCCAGATG
CTGCACCAGG GCCAGGACGT GATTCCCGTG GAGTTCATCG CGCTGCGCGA CGGCGGCAAA
TACCTGGGCG CCCACCACCA GAGCCTGGTC GTCAACGCCA TTGCCCAGGC CCAGGCCCTG
ATGGAGGGGC GCCACGGAGA AGAAGGGGCA GAGCGCCATT GCGCGGGCAA CCGGCCCAGC
AGCTTCCTGC TGCTGCAGCA GCTGGACCCG GCATCGCTGG GCGCACTGAT CGCGTTGTAC
GAGCACCGTG TCTTCTCGGC CGGTGCGGTC TGGGGCATCA ACAGCTTCGA CCAGTGGGGC
GTGGAGCTGG GCAAGCACCT GGCGCGCCAG CTGCATGCGC GCCAGGACAG CGGCGACTGG
CAGGGCGTCG ATGCCTCGAC GCAGGGCCTC ATGCACCGGC TTGCGGCAGG GTCGGCCGGC
TGA
 
Protein sequence
MKTLPVLCNT LPAWPALESH FHEDIQTLDL RQAFAADAGR LDALSQQAPH VFADLSKNLW 
TERTEELLRE LAQQTGVLAQ RDAMLAGEPV NCTEGRAVMH WLLRMPRDGG QLRHCATVQQ
WQPAMHEALG QVHETLDAML ALAEQVRGDE GITDIVNIGI GGSHLGPEVV VNALEDWVDA
GKNFHFVSNV DGHELGHVLR RVRPHSTLFL IASKSFTTAE TMLNAHSARR WFLEQGGSED
PQAACSIDRH FVALTTNVQA AADFGIRRTL GFWDWVGGRF SLWSAIGLPV AIAIGAAQFR
ALLDGAHAMD AHFFSSGVEG NLPLRLGLLD VWYRDFCGFS SRCIAPYSHG LRRLTAYLQQ
LEMESNGKGV TRDGQTLPVR TAPVIWGEPG TNGQHAFFQM LHQGQDVIPV EFIALRDGGK
YLGAHHQSLV VNAIAQAQAL MEGRHGEEGA ERHCAGNRPS SFLLLQQLDP ASLGALIALY
EHRVFSAGAV WGINSFDQWG VELGKHLARQ LHARQDSGDW QGVDASTQGL MHRLAAGSAG