| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5662 |
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| Symbol | |
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| ID | 5751282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6296831 |
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| End bp | 6298108 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300794 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001566675 |
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| Protein GI | 160901093 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.182521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00876567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCG CAGACCAGGG CGCGTCGTCG CCCACCGCCC ATCTGTTCAA CCCGCTGTTC
GCACAGCCCG AAGGCTCGCC GATCCGCGAG CTGTTTCCCT ACCTGAGCCG TCCCGGCATG
CTCTCGCTGG CCGGAGGCTA TCCATCGCCC AGCCTGTTCG ATGCCGAAGG TTTGCAGCAG
GCCGCCATGG CCGCGCTGCA GCAGGATGCC GCCACCAGCC TGCAGTACGG CGCCAGCGAA
GGCCAGCTTG CGCTGCGCGA AGCCCTGGCC GCGCTGTGCG CCACGCGCGG CATTGCCTGC
ACGCCGGCCG ACATGATCGT GACCACGGGC TCGCAGCAGG CCTTCGATCT GCTGGTCAAG
GTGCTGGTCG AGCCCGGCGA TCCGGTGCTG GTCGAAGTGC CCGCCTACCC GGCCACGCTG
CAGACCCTGA AGCTGGCCCA GGCACAGGTC GTTGCCGTGC CCACGGACGA GCAGGGCCTG
GACACCGAGG CCCTGGCCCG CCTGCTGGCG CAGTGGCCCC ATGCGCGCGC CCCCAAGATG
CTCTACACCG TGCCCAACTT CTCCAACCCG GGCGGCACCC TGCTGCCCGC GGCGCGGCGC
ACGGCCCTGG TGGAGCTGGC GCGCCAGCAT GGCTTTGTCA TCGTCGAGGA CGATCCCTAT
GGCGAGCTGC GCTTTGCCGG CCAGCGCGAA CCGTCGATCT ACGAAACGGG CCTGGCGCTG
TGCGGCGCCC AGGCCAATCC CGTGGTCTAC CTGTCCAGCC TGTCCAAGAC CGTGGCGCCT
GCGCTGCGCA TCGGCTGGAT GCTGGCCGAC GCCCAATTGC TGCGCCGCTG CACCATCGCC
AAGCAGACGG CCGATCTGTG CACCTCGCCG CTGGCGCAGA TGATCGCCGC GCACTATCTG
CGCTCGGGCC GCTATGCGCC CCAGCTGGCC CAGGCCTGCG CCGAGTACGC GGCGCGCATG
GATGCGCTGT GCTCCGGCAT GCAGTCGGCG CTGGGCGATC AGATCCGCTT CGTGCGGCCT
GCGGGGGGCA TGTTCGTCTG GGCCCGGCTG CTGCCGCCGC AGCGGCTTGC GGGCGATTCC
CAGGCCCTGG CCCGTGCGCT GTTCACGGCA GCGGTGGAGC AGGGCGTGCT CTATGTGCCG
GGCAAGGCCT TCTTCCCGGC CGATGCGGCA GACAAGGCCG GCCTGTGCAT GCGCCTGTCG
TATGCGGCGC CCACCGTGCC CCAGATCACC GAGGCCGTGG CACGCCTGGG CCGGGCCTGG
GGCCAGGCCG TGTCCTGA
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| Protein sequence | MSTADQGASS PTAHLFNPLF AQPEGSPIRE LFPYLSRPGM LSLAGGYPSP SLFDAEGLQQ
AAMAALQQDA ATSLQYGASE GQLALREALA ALCATRGIAC TPADMIVTTG SQQAFDLLVK
VLVEPGDPVL VEVPAYPATL QTLKLAQAQV VAVPTDEQGL DTEALARLLA QWPHARAPKM
LYTVPNFSNP GGTLLPAARR TALVELARQH GFVIVEDDPY GELRFAGQRE PSIYETGLAL
CGAQANPVVY LSSLSKTVAP ALRIGWMLAD AQLLRRCTIA KQTADLCTSP LAQMIAAHYL
RSGRYAPQLA QACAEYAARM DALCSGMQSA LGDQIRFVRP AGGMFVWARL LPPQRLAGDS
QALARALFTA AVEQGVLYVP GKAFFPADAA DKAGLCMRLS YAAPTVPQIT EAVARLGRAW
GQAVS
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