| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5627 |
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| Symbol | |
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| ID | 5751247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6257300 |
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| End bp | 6258418 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300760 |
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| Product | porin |
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| Protein accession | YP_001566641 |
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| Protein GI | 160901059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0464814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0831491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTAT TCATACGCCA TGCCCTGGCC GCCTCGCTGG GGGTGGCCGC CGCACATGCG
GGCGCGCAGT CCTCGGTATC GATCTCGGGC ACCGTCGATG TGAGCGTCAG GCAGGTGCGC
AACCAGGGCC TGGGCACGGT CACCTCGCAG GCCAGCGGCG CCAACTCCAC CAGCAAGCTG
GTATTGCGGG GGCAGGAGGA CCTGGGCGAC GGCCTGAGCG CGGGCTTCTA CCTGGACGGC
AGCCTGCTGG CCGACACCGG CGCCATGGGC GCCAGCGGCC CGTTCTGGGA CCGGCGCTCC
ACGGTCAGCC TGGCCTCGCG CCAATGGGGC GAGCTGCGGC TGGGGCGGGA CTGGGTGCCC
ACGCACCTGG TGTGGAGCGG CTTCGATCCG TTTGCCACGC TGGGCATCGG CAGCGCCAAT
GGCTTTCGCT CGTTCACGGC TTCCCGCGCG CTGGGCCAGG CCTTCGGCAC GGCGCCGGAG
TCGCAGGCGG CCAATCCCAC GCTGCGCGTG AGCAATGCGG TGGAGTATTT CCTGCCGGCC
GGCCTGGGCG GGCTGCAGGG CGTGTCCGGC AGCCTGATCG CCACCTTGGG CGAGAAGGGC
GCCACGGCGG CAGGCCAGAC GCGCGGCAAC GGCTTTCGGC TGGGCTGGGC GGGCGCGGGC
TGGAACGTGG CGGGCGCGCA GTTCACCACG CGCAACACCC TGAGCGGCAT CCATTTCAAG
GACCAGAGCT ACGGTGTCTC CTACGACTTC GGCTGGCTCA AGGCCAGCCT GGCCCAGCGC
CGCTGGGTGC ATGGCGTGGA CCGCACGGTC AACACCCTGG TGGGCATGAG CGTTCCCGTG
GGCAGCGGGG TGGTCAAGCT CAGCTACGTC AAGGCCGACC AGACGGGCGC GACGGCGGCG
CAAAGCGCCA GCGATGCCGA CCTGTGGGCG CTGGGCTATG TGCACTCGCT GTCGCGGCGC
ACGGCGCTGT ACGCGCATGC GGCCCGCATG TCCAACCGCA ATGGGGCGGC CTTCGCCATT
GCCGGGGGTG TGGCAGTCAG CGGCAATCCG GCCGCGGCCA ATTACTTTGG CGGGCGCGCC
TCCACGGCCT TCGAGCTGGG CATCCGGCAC GACTTCTGA
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| Protein sequence | MQVFIRHALA ASLGVAAAHA GAQSSVSISG TVDVSVRQVR NQGLGTVTSQ ASGANSTSKL
VLRGQEDLGD GLSAGFYLDG SLLADTGAMG ASGPFWDRRS TVSLASRQWG ELRLGRDWVP
THLVWSGFDP FATLGIGSAN GFRSFTASRA LGQAFGTAPE SQAANPTLRV SNAVEYFLPA
GLGGLQGVSG SLIATLGEKG ATAAGQTRGN GFRLGWAGAG WNVAGAQFTT RNTLSGIHFK
DQSYGVSYDF GWLKASLAQR RWVHGVDRTV NTLVGMSVPV GSGVVKLSYV KADQTGATAA
QSASDADLWA LGYVHSLSRR TALYAHAARM SNRNGAAFAI AGGVAVSGNP AAANYFGGRA
STAFELGIRH DF
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