Gene Daci_5601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5601 
Symbol 
ID5751221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6229231 
End bp6230142 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID641300734 
Productalpha/beta hydrolase fold 
Protein accessionYP_001566615 
Protein GI160901033 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.988839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCA CCTGCATTCG CGAGCTGCCT CACGGCATCC ATCTGCACTG CCGCGTCAGC 
GGCGAACCCG GCCGGCCGTT GCTGCTGTTC CTGCACGGTT TTCCCGAGGA CAGCTTCATC
TGGGAAGGCA TGCTGGAGCA GTTCGGCGCG CAATGGCGTT GCGTCGCCCC CGATCTGCGG
GGCTTTGGCC ATTCCAGCCA GCCGGCCGGC GTGGAGCAGT ACAAGGCCAA GCACCTGCTG
CAGGATCTGG CGGCGCTGAT CGCCATCGAA AGCCCTGGCG CACCCGCAGC CTGCGTGATC
GCCCACGACT GGGGGGGTGC CCTGGCCTGG GGTCTGGCCA ATCGCCATCC CGGGCTGATG
CAGCGGCTGA TGATCCTCAA CGCCCCGCAT CCAGGCGCCT TTCTGCGCGA GTTGCTGGAC
AACCCCGTGC AGCAGGCCGC AAGCCAGTAC ATGCATTTCC TGCGCCGCCC CGACGCACCC
GCCCTGCTGG CCGACAACGA CTGGCAGCGC ATGCTGGGAT TTTTCCGCAC ACCGCAGGGC
GAGTTGCCCG GCTGGCTCAC GCCGCAGTTG CAGCAGCGCT ACCGCGAGCA CTGGGACCTG
GGCGTGCAAG GCTCCTGCCA CTACTACGGC GCCAGTCCCC TGGTGCCGCC CCGGCCCGAA
GACCCGGACT CAGCCGACGC ACTGCGCAAC CTGAGGCTGC CGCCCGAGAT GCTGGACATC
GGCGTGCCCA CGCATGTGCT CTGGGGCGAC AGCGACCCGG CGCTGCAGCC CGCCCTGGTC
GAAGGCCTGG AGCCGTGGGT GCCGCGCCTG ACGGTGCAGC ACCTGGCAGG CACTTCGCAC
TGGGTCGTGC ACGAGCAGCC AGATGCGGTG CGGCAAGCGC TGGAGCAGTT CCTGTCCCGC
CCCGTTCAGT AG
 
Protein sequence
MVTTCIRELP HGIHLHCRVS GEPGRPLLLF LHGFPEDSFI WEGMLEQFGA QWRCVAPDLR 
GFGHSSQPAG VEQYKAKHLL QDLAALIAIE SPGAPAACVI AHDWGGALAW GLANRHPGLM
QRLMILNAPH PGAFLRELLD NPVQQAASQY MHFLRRPDAP ALLADNDWQR MLGFFRTPQG
ELPGWLTPQL QQRYREHWDL GVQGSCHYYG ASPLVPPRPE DPDSADALRN LRLPPEMLDI
GVPTHVLWGD SDPALQPALV EGLEPWVPRL TVQHLAGTSH WVVHEQPDAV RQALEQFLSR
PVQ