| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5542 |
|---|
| Symbol | |
|---|
| ID | 5751162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6157457 |
|---|
| End bp | 6158479 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300675 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001566556 |
|---|
| Protein GI | 160900974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.479169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACC TCAAGCTGGC ACTGGGTGCG CTGGCCGCGG AAATCGCCTC CTGGAGCAGC
CTGTGGCTGC TGCGCAGCCA GTCGGATGCG GCCCTGCTGG GCTATCTCAC GGCCCACGGG
CTGGCCAGCG GCCTGCTGGC GCTGTGCCTG GCGCCCTTCC TGGCCACCTC GGCCAAGTCG
GTGCGCCAGC GGCTGGCTTT GGTGGTGCTG ATGGGGTTGT TTGCCTATGC CGTGCCGGTG
GCCGGCATTT TGGGCGCCGT GGTCGCCACC ATTGCGCTGC ACACCCAGCG CGGCCCGCGT
GGCGGCCCGC GTTTCCCGGT GATGCCGCTG CCCGATTTCG ACCCGCACCA GCAGGCCAGC
ACCAGCCGCC GCCAGGCGGG CCTGCAGTCC TTCCTGGCCA ATCCCAATGT GCCGGTCGCC
TCACGCATGC GGGCGATGGT GGCGCTGGGC AGCGTGCCGG GGCGCATTGC CTCGCCCATG
CTGCGCACGG CGCTGGGCGA TTCCAGCGAA GACCTGCGCC TGCTGGCCTA CAGCATGCTG
GACGCCAAGG AGCGCGAGAT CAGCAAGACC ATCCACCAGG AGCTGCAGCT GTTCGAGCAT
GCCCGCCAGT CCGAGGGCGA TGCGCCCTAC GGGCCGCGCG GCCTGCAGGC GGCGCGGGCG
CTGACCGACC TCTACGCGGA GCTGGTCTAC CAGGGCGTGG CGCAGGGCGA TGTGCGCGAC
CACGCCATCA AGCAATCCCT GCACTACTGC GACCTGGTGC TCGCTCAGCG GCCCGACAAC
GCCTTGCTGC TGCTGCGCCG TGGCCGGCTG CTGCACATGC AGGGCAGGGC GGTGGAGTCG
CTGGCCTGCT ATGAGCGCTC GCTGGCGCTG GGCATGGAGC CGGCACGCGT CGTGCCCTAC
CAGGCCGAGC TGCTGTTCGA TCGGCGCGAA TTCGCCAAGG CGCAGGCCCT GATGCGTTCG
CTGGACATCG AGCAGGCCCT GCCGCGCCTG AAGCCCAGCA TCCGCTACTG GAGTGCCTCA
TGA
|
|---|
| Protein sequence | MLNLKLALGA LAAEIASWSS LWLLRSQSDA ALLGYLTAHG LASGLLALCL APFLATSAKS
VRQRLALVVL MGLFAYAVPV AGILGAVVAT IALHTQRGPR GGPRFPVMPL PDFDPHQQAS
TSRRQAGLQS FLANPNVPVA SRMRAMVALG SVPGRIASPM LRTALGDSSE DLRLLAYSML
DAKEREISKT IHQELQLFEH ARQSEGDAPY GPRGLQAARA LTDLYAELVY QGVAQGDVRD
HAIKQSLHYC DLVLAQRPDN ALLLLRRGRL LHMQGRAVES LACYERSLAL GMEPARVVPY
QAELLFDRRE FAKAQALMRS LDIEQALPRL KPSIRYWSAS
|
|---|
| |