| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5480 |
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| Symbol | |
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| ID | 5751098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6084451 |
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| End bp | 6085035 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300611 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001566494 |
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| Protein GI | 160900912 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGGCG CGGTGGCCGC GCCAGCCTGG GCTGGCGGGC AGCTGGAAGA GCCGCTGGCC
GATTCGGTGC GCACCGCGCT GAGTTCGGCC GTCACGGGAT CGGCGCCGCC CGAGCTGCGC
TTTGCCTCTA CCGAGGCCCG CATGGACTAT CTGCGCTGGC TCACTGCCAG CAGCGAGCGC
CTGCGTTCGC GCAAGCCCGA ACTGGCGACT CGGCTGGAGT TCCTGCAAAC CGTCTGGTAC
GAGTCCAAGC GCGCCGGCCT GGAAGTCTCG CTGGTGATGG GGCTGGTGCA GGTGGAGAGC
GCGTTCCGCA AGTTCGCCAT CTCCAGCGTG GGCGCGCGCG GCTATATGCA GATCATGCCG
TTCTGGATGC GGCTGATCGG CGATGGCGAC ATCGGCAAGC TGTTTCACAT GCAGACCAAT
CTGCGCTTTG GCTGCGTGAT CCTGCGCCAC TATCTGGACC GCGAAAACGG CGATGCCTAC
ATGGCGCTGG GCCGCTACAA CGGCAGCCGC GGCCAGCCCC AGTATCCGAA TGCGGTGTTT
GCTGCGCAGC GCCGCTGGGA GATCGAGCCC TCGCGCTCGG CCTGA
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| Protein sequence | MLGAVAAPAW AGGQLEEPLA DSVRTALSSA VTGSAPPELR FASTEARMDY LRWLTASSER
LRSRKPELAT RLEFLQTVWY ESKRAGLEVS LVMGLVQVES AFRKFAISSV GARGYMQIMP
FWMRLIGDGD IGKLFHMQTN LRFGCVILRH YLDRENGDAY MALGRYNGSR GQPQYPNAVF
AAQRRWEIEP SRSA
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