Gene Daci_5459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5459 
Symbol 
ID5751077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6059856 
End bp6060494 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID641300590 
Producthypothetical protein 
Protein accessionYP_001566473 
Protein GI160900891 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.681544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC AGTCCCCTTT TTCTTTTCTG AACGGTCTCA TGGAACGCGT GATGGCCGGT 
CCGCAACCGC CGCAATGGCT GGTCAGCGAG GTGCATCAGC GCCTCGTGCT GTTCCTCAAC
CATGTGCTGA TGCAGGAGAA AGAGGCGATG GAGCGCCTCG TGCGGCAAAA GGGCCGCGTG
GCGCGCGTGC AGTGGCGCGG CTACTCCATG GCCCTGCAGA TCACGCCCGC CGGCCTGTTC
AACGTGGCGC CCGAAGGCGC GCAGCCCGAC CTGCTGCTTG AAGTCACCGA GACCTCCCCG
CTGGCCCTGG CCCAGGTGGC CCTGCGCGGC GACAAGCCCT CCATCCGCAT CGAGGGCGAC
GTGCAACTGG CCGCCGACAT CAACTGGCTG GTGGACCACG TCGAATGGGA CGTGGAGGAA
GACCTGGCCC GCATCATCGG CGATGCGCCC GCGCACACCG TGGCCAAGGT CGCGCGCAGC
GCCGCCCAGG CGCTGCGCCA GTTTGTGGGC GCCCGCATGG CCGGCAAGCC CGATGCCGAT
GCCCCCGCCC CCGAGGCCGC ACGTGCGGCA GCGCCCGCCA GCGCGCCCAT TGGTTCCCCC
GTGGTATCCC TGCCCGGTTT CGAGAACGAC AAGCCATGA
 
Protein sequence
MATQSPFSFL NGLMERVMAG PQPPQWLVSE VHQRLVLFLN HVLMQEKEAM ERLVRQKGRV 
ARVQWRGYSM ALQITPAGLF NVAPEGAQPD LLLEVTETSP LALAQVALRG DKPSIRIEGD
VQLAADINWL VDHVEWDVEE DLARIIGDAP AHTVAKVARS AAQALRQFVG ARMAGKPDAD
APAPEAARAA APASAPIGSP VVSLPGFEND KP