Gene Daci_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5451 
Symbol 
ID5751069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6050184 
End bp6050669 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID641300582 
ProductNUDIX hydrolase 
Protein accessionYP_001566465 
Protein GI160900883 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA TGCCAGGCTA CAAGATCCCT GAATCGGTGC TGGTCGTCAT CTACCGCGAT 
GACGGGCAGG TGCTGCTGAT GCGCCGCACG GCACCGGCGC CTGAGGGCGG GGAGTTCTGG
CAGTCGGTGA CGGGCAGCAA GGACCATGAA GGCGAGTCCT GGCGCGAGAC CGCAGTGCGC
GAGGTGCGGG AAGAAACCGG CATCGATCCC GAGGCGCCCG GCTGCCTGCT GCAGGACTGG
GCGCTGGAGA ACATCTACAC CATCTACCCG GCCTGGCAGC ACCGCTATGC GCCCGGTGTA
TGGCACAACC GCGAGAGGGT TTTCGGCCTG CGGATTCCGT CCTACACCCC TGTGTTCTTG
AATCCGAGGG AACATACCGC ATCTGCTTGG CATCATTGGC ATGACGCTGC CGAGCGCTGC
TACTCCCCGT CCAATGCGGA AGCCATCCTG ATGCTGCCGC GATTCGCTTC ACTGGAGCTG
GACTGA
 
Protein sequence
MPAMPGYKIP ESVLVVIYRD DGQVLLMRRT APAPEGGEFW QSVTGSKDHE GESWRETAVR 
EVREETGIDP EAPGCLLQDW ALENIYTIYP AWQHRYAPGV WHNRERVFGL RIPSYTPVFL
NPREHTASAW HHWHDAAERC YSPSNAEAIL MLPRFASLEL D