| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5254 |
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| Symbol | |
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| ID | 5750866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5822439 |
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| End bp | 5823098 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300379 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001566268 |
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| Protein GI | 160900686 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1278] Cold shock proteins
[COG3326] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.737386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCAGC AGGGACGTCT CACCGGCTGG AAGGACGAGC AGGGCTTCGG CTTCATCGAA
CCCGATGGAG GCGGCGCGCA GGTCTTTGTC CATATCAAGT CCTTCACCGA TCGCCGCCGC
AGGCCCGAGG GCGGAGAGCG TGTCAGCTAC GTGGCCAGCC GCAACGCCCA GGGAAAATGG
CGCGCGCAGG ATGTGGCGTT CATTGGCGAA CCAAGGACCG GCCGCCCGCA GCCTGCGCGG
CGAAGCCGTG CCGGCATGCC TTCGCGGCCT CTGCCGCCTG TGCGAGGCCC GGTGGCGGTG
GGCCTGGCCG CTGCCTTCTT CTGCGTGCTG CTGGCTGTTG CCTGGAGCGG CCGCATGCCC
TGGACACTGG TCGGCCTGTA TGCGGCGGCA AGCTTTGTGA CCTTCATGGT CTATGGATTC
GACAAGTCCG CCGCCAGGCA CGACCGCTGG CGCACCAGCG AAAGCCGTCT GCACCTGCTG
GCACTGCTGT GCGGCTGGCC CGGCGCGCTG CTCGCGCAAG GGCTGCTGCG GCACAAGTCC
AGCAAGGCCT CTTTCCAGTT GGTGTTCTGG ATCACCGTGG TGCTCAACTG CGGCCTGCTG
GCCTGGCTGC TGTCATCGGC AGGTGCGCCG CTGCGGGCGC TGGCGCCCGG CATCTTCTGA
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| Protein sequence | MRQQGRLTGW KDEQGFGFIE PDGGGAQVFV HIKSFTDRRR RPEGGERVSY VASRNAQGKW
RAQDVAFIGE PRTGRPQPAR RSRAGMPSRP LPPVRGPVAV GLAAAFFCVL LAVAWSGRMP
WTLVGLYAAA SFVTFMVYGF DKSAARHDRW RTSESRLHLL ALLCGWPGAL LAQGLLRHKS
SKASFQLVFW ITVVLNCGLL AWLLSSAGAP LRALAPGIF
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