Gene Daci_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5253 
Symbol 
ID5750865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5821758 
End bp5822420 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID641300378 
Producthypothetical protein 
Protein accessionYP_001566267 
Protein GI160900685 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.545904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.544108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG CCGGACCACG GGCCCAAATG CCCTCCGCAA ACGATGCATC GCTGCAGACC 
TGGCAGGCGT CTTGGGATAG CGCCTGGTCC GCACTGGGTG CCAGCGCTCC GCAGCCTGTG
CTGGCCGAGC TGCTGCAAAG CTACAGCGAG CCCCAGCGCC ACTACCACAC GCTGCAGCAT
CTGGGCGAGG CCATGGGCCT GCTGCAACCG GCGCTGGGCC TGGCCGCGCA CCCCGGCGAG
GTGGCTCTGG CGCTGTGGTT CCATGACGCT GTCTACCAAA CACAAGCCAA GGACAACGAG
GCGCGCAGCG CCGACTGGGC CGCCGCCGTG CTGCGCGGGC AGGGCCTGCC GGCGGAAGTG
GCCGGGCGCG TGCACGGCCT GATCATGGCG ACCTGCCACG CTGCACAGCC GTCCGGAATC
GACGCCCAAC TGCTGGTGGA TGCCGACCTG GGCATTCTGG CGGCCGACCC CCTGCGCTTT
GCCGAATACG AGCTGCAGGT GCGGGCCGAG TACGAATGGG TGCCCTTGCC GCTGTACCGC
GCCAAGCGCC GCGAGGTGCT GCAGGGCTTC ATGCAGCGCG AGGCCATCTA CTGCACCGAC
TGGTTCCGGC AACGGCTGGA GGTGCGGGCG CGGCGCAACC TCGCGCAGGC GCTGGGTTTG
TAG
 
Protein sequence
MTHAGPRAQM PSANDASLQT WQASWDSAWS ALGASAPQPV LAELLQSYSE PQRHYHTLQH 
LGEAMGLLQP ALGLAAHPGE VALALWFHDA VYQTQAKDNE ARSADWAAAV LRGQGLPAEV
AGRVHGLIMA TCHAAQPSGI DAQLLVDADL GILAADPLRF AEYELQVRAE YEWVPLPLYR
AKRREVLQGF MQREAIYCTD WFRQRLEVRA RRNLAQALGL